RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 UGT2B28Q9BY64 529 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 PTK2BQ14289 1009 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 DDIASQ8IXT1 998 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 FEZF2Q8TBJ5 459 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 MS4A14Q96JA4 679 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TRIM51Q9BSJ1 452 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 APOL6Q9BWW8 343 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 A0A087WWV3 80 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 SERPINE1P05121 402 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ATXN3P54252 364 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ELF3P78545 371 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 DAB2P98082 770 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF211Q13398 564 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 NCF4Q15080 339 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 SPANXN2Q5MJ10 180 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 PLEKHM3Q6ZWE6 761 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TAGAPQ8N103 731 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 FAM124BQ9H5Z6 455 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 RAB6BQ9NRW1 208 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TMEM191CA6NGB0 347 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 F9P00740 461 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ATICP31939 592 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 RAD51Q06609 339 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TCP10Q12799 353 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 STOML2Q9UJZ1 356 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ROBO2Q9HCK4 1378 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 PTPRMP28827 1452 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 CD58P19256 250 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 BFSP2Q13515 415 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 PPRC1Q5VV67 1664 aaKnown RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 SDR42E2A6NKP2 422 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 M0QYV0 167 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 BIRC5O15392 142 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 RBP3P10745 1247 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 GCNT1Q02742 428 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 PPIDQ08752 370 aaKnown RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TMC2Q8TDI7 906 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 OXNAD1Q96HP4 312 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TASP1Q9H6P5 420 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 CATSPERBQ9H7T0 1116 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 CHN2P52757 468 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 DGCR14Q96DF8 476 aaKnown RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TMEM237Q96Q45 408 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 LRMDAQ9H2I8 198 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 CLEC4MQ9H2X3 399 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 RRN3Q9NYV6 651 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 TK2O00142 265 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 ANXA6P08133 673 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 GCLCP48506 637 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-204ENST00000375290 OSBPL11Q9BXB4 747 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 FBXO28Q9NVF7 368 aa10.58□□□□□ -0.72
PTCH1-204ENST00000375290 CD4P01730 458 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ENO3P13929 434 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 RFX4Q33E94 735 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 C12orf60Q5U649 245 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ARMC3Q5W041 872 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 MFSD5Q6N075 450 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 STOX1Q6ZVD7 989 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ULK2Q8IYT8 1036 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 PDCD6IPQ8WUM4 868 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 COA7Q96BR5 231 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 NFAT5O94916 1531 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 PRKAB2O43741 272 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 UBOX5O94941 541 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 NUDT2P50583 147 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 TMA16Q96EY4 203 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 DCLK3Q9C098 648 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 NIF3L1Q9GZT8 377 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 POLG2Q9UHN1 485 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 SF3B1O75533 1304 aaKnown RBP eCLIP10.57□□□□□ -0.724e-7■■■■■ 133.7
PTCH1-204ENST00000375290 OCM2P0CE71 109 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 OCMP0CE72 109 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 IL12AP29459 219 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ADARP55265 1226 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 LACTB2Q53H82 288 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 CCNB1IP1Q9NPC3 277 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 RBP5P82980 135 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 MAPRE1Q15691 268 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 RIN2Q8WYP3 895 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 C21orf59P57076 290 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 CHI3L2Q15782 390 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 LRRC38Q5VT99 294 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 SLC10A4Q96EP9 437 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 AK5Q9Y6K8 562 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 HIST1H2AGP0C0S8 130 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 HIST1H2ADP20671 130 aa10.57□□□□□ -0.72
PTCH1-204ENST00000375290 TRIM71Q2Q1W2 868 aaKnown RBP10.57□□□□□ -0.72
PTCH1-204ENST00000375290 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms