RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 PDE11AQ9HCR9 933 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SPATA6Q9NWH7 488 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZNHIT6Q9NWK9 470 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 HCFC1R1Q9NWW0 138 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FBXL5Q9UKA1 691 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 MTF2Q9Y483 593 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ZFP37Q9Y6Q3 630 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-202ENST00000374949 KANSL1LA0AUZ9 987 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PTGESO14684 152 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 EPHB6O15197 1021 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 C4BPAP04003 597 aaKnown RBP11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 CD72P21854 359 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 OSTNP61366 133 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 PUM1Q14671 1186 aaKnown RBP eCLIP11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TRIM65Q6PJ69 517 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RRAGAQ7L523 313 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 TMTC1Q8IUR5 882 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 WDR49Q8IV35 697 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 NPAS3Q8IXF0 933 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FBXL13Q8NEE6 735 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 LNX1Q8TBB1 728 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ING5Q8WYH8 240 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SHDQ96IW2 340 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ACAP3Q96P50 834 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 BCO2Q9BYV7 579 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 GANQ9H2C0 597 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 SIX2Q9NPC8 291 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
HLA-DQA1-202ENST00000374949 ESPNB1AK53 854 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ARHGAP6O43182 974 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 LAMTOR5O43504 91 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 XYLBO75191 536 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 RECQL4O94761 1208 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 UCHL3P15374 230 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 FECHP22830 423 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 HNRNPH3P31942 346 aaKnown RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 GRM5P41594 1212 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 WNT7BP56706 349 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 APBA1Q02410 837 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ENOX2Q16206 610 aaKnown RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 DUOXA2Q1HG44 320 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 RSPO4Q2I0M5 234 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PDXDC1Q6P996 788 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 MTSS1LQ765P7 747 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 TMEM139Q8IV31 216 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CD302Q8IX05 232 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CEP120Q8N960 986 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 LMO3Q8TAP4 145 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 BAP1Q92560 729 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SYN2Q92777 582 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 DDX23Q9BUQ8 820 aaKnown RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CCDC94Q9BW85 323 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 NLRC4Q9NPP4 1024 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SNTG2Q9NY99 539 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 NCDNQ9UBB6 729 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PYCARDQ9ULZ3 195 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 MYO6Q9UM54 1294 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ACACBO00763 2458 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 TRIP11Q15643 1979 aa11.7□□□□□ -0.54
HLA-DQA1-202ENST00000374949 COL4A2P08572 1712 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 FAM170BA6NMN3 283 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 LACTBL1A8MY62 500 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PHACTR2O75167 634 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 IGFBP6P24592 240 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 HOXA9P31269 272 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CDK17Q00537 523 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PRKCQQ04759 706 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 CSTF1Q05048 431 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 BIRC3Q13489 604 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 NAB2Q15742 525 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SLC10A6Q3KNW5 377 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ZACNQ401N2 412 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PABPC1LQ4VXU2 614 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SLC44A4Q53GD3 710 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SFMBT2Q5VUG0 894 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 TPRG1Q6ZUI0 275 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 KIAA1524Q8TCG1 905 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SEMA4DQ92854 862 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SPAG5Q96R06 1193 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 STK33Q9BYT3 514 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 ASB7Q9H672 318 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 PLEKHA5Q9HAU0 1116 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 LTB4R2Q9NPC1 389 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 DNMT3BQ9UBC3 853 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 APEX2Q9UBZ4 518 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 FHOD1Q9Y613 1164 aa11.69□□□□□ -0.54
HLA-DQA1-202ENST00000374949 LRRC53A6NM62 1247 aa11.68□□□□□ -0.54
HLA-DQA1-202ENST00000374949 I3L4J1 428 aa11.68□□□□□ -0.54
HLA-DQA1-202ENST00000374949 SPTLC1O15269 473 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms