RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ALOX15BO15296 676 aa21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 TRMUO75648 421 aaKnown RBP21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 ALOX15P16050 662 aaPredicted RBP21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 SLC15A3Q8IY34 581 aa21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 ICA1LQ8NDH6 482 aa21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 MZB1Q8WU39 189 aa21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 BRD8Q9H0E9 1235 aa21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 HEMK1Q9Y5R4 338 aaPredicted RBP21.55■■□□□ 1.04
TMEFF1-201ENST00000374879 ATRNL1Q5VV63 1379 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 PNMA6FA0A0J9YX94 578 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 PORP16435 677 aaPredicted RBP21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 CYP4A11Q02928 519 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 FAM111AQ96PZ2 611 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 C17orf75Q9HAS0 396 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 TBCCD1Q9NVR7 557 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 MYOCOSA0A1B0GUC4 107 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 SERPINB2P05120 415 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 BMP3P12645 472 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 IDO1P14902 403 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 RFX1P22670 979 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 PMLP29590 882 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 STIP1P31948 543 aaKnown RBP21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 ZNF543Q08ER8 600 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 CCNIQ14094 377 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 TFDP1Q14186 410 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 HIC1Q14526 733 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 GRAMD1BQ3KR37 738 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 TTBK2Q6IQ55 1244 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 HIPK4Q8NE63 616 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 USP6NLQ92738 828 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 SPATA7Q9P0W8 599 aa21.54■■□□□ 1.04
TMEFF1-201ENST00000374879 CAPN8A6NHC0 703 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 PRR5-ARHGAP8B1AHC4 643 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 E9PBE3 544 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 LPXNO60711 386 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 SSTR1P30872 391 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 HOXD12P35452 270 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 ARHGAP8P85298 464 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 SLC25A3Q00325 362 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 PLCB3Q01970 1234 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 SPIRE1Q08AE8 756 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 BFSP1Q12934 665 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 USH1GQ495M9 461 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 CCDC92Q53HC0 331 aaPredicted RBP21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 BBS5Q8N3I7 341 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 MYCT1Q8N699 235 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 DDX4Q9NQI0 724 aaKnown RBP21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 IGKV6D-41A0A0C4DH26 115 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 TTLL13PA6NNM8 815 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 H3BSA7 217 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 BBOX1O75936 387 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 DHRS4L1P0CG22 281 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 SLC16A2P36021 539 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 CPOXP36551 454 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 ALDH18A1P54886 795 aaKnown RBP21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 NCKAP1LP55160 1127 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 LPIN1Q14693 890 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 KBTBD12Q3ZCT8 623 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 ADGRD1Q6QNK2 874 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 PAFAH2Q99487 392 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 CCDC106Q9BWC9 280 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 POLIQ9UNA4 740 aa21.53■■□□□ 1.04
TMEFF1-201ENST00000374879 EMSYQ7Z589 1322 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 TMEM247A6NEH6 219 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 GOLGA8SH3BPF8 625 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 GOLGA8MH3BSY2 632 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 RPA1P27694 616 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 ETV4P43268 484 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 MTTPP55157 894 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 ARHGAP4P98171 946 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 CHSY1Q86X52 802 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 MARVELD2Q8N4S9 558 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 ABHD8Q96I13 439 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 BTBD9Q96Q07 612 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 OLFML3Q9NRN5 406 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 AGPAT3Q9NRZ7 376 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 CLUHO75153 1309 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 ARHGAP10A1A4S6 786 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 FDFT1P37268 417 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 RPL26P61254 145 aaKnown RBP21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 ZNF200P98182 395 aaPredicted RBP21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 GPS1Q13098 491 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 SNAPC2Q13487 334 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 Q6ZNX1 250 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 MRPL1Q9BYD6 325 aaKnown RBP21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 PPCSQ9HAB8 311 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 DMAC2Q9NW81 257 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 KCNK4Q9NYG8 393 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 LTBP4Q8N2S1 1624 aa21.52■■□□□ 1.04
TMEFF1-201ENST00000374879 SPATA31A6Q5VVP1 1343 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L15C9J2P7 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L13C9JLJ4 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L11C9JVI0 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L18D6R9N7 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L22D6RA61 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L17D6RBQ6 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L19D6RCP7 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L20D6RJB6 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 DKC1O60832 514 aaKnown RBP eCLIP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms