RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MAGEB18Q96M61 343 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 PARK7Q99497 189 aaKnown RBP14.68□□□□□ -0.06
HMGCL-203ENST00000374490 EURLQ9NYK6 297 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 DNPEPQ9ULA0 475 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 NAALADL1Q9UQQ1 740 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 PTCH2Q9Y6C5 1203 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 IVNS1ABPQ9Y6Y0 642 aa14.68□□□□□ -0.06
HMGCL-203ENST00000374490 TCP11X1B4DZS4 312 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 PGK2P07205 417 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 TNFSF9P41273 254 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 ARSEP51690 589 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 GTF2A1P52655 376 aaPredicted RBP14.67□□□□□ -0.06
HMGCL-203ENST00000374490 IL9RQ01113 521 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 ZNF252P-AS1Q0IIN9 211 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 DAB2IPQ5VWQ8 1189 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 CENPUQ71F23 418 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 FUKQ8N0W3 1084 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 ANKRD42Q8N9B4 389 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 SAYSD1Q9NPB0 183 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 DNAJC17Q9NVM6 304 aaKnown RBP14.67□□□□□ -0.06
HMGCL-203ENST00000374490 HAUS2Q9NVX0 235 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 SMG5Q9UPR3 1016 aaKnown RBP14.67□□□□□ -0.06
HMGCL-203ENST00000374490 ARL2BPQ9Y2Y0 163 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 PLXNB2O15031 1838 aa14.67□□□□□ -0.06
HMGCL-203ENST00000374490 LOC102724159A0A0B4J2E5 919 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 EXOC1LA0A1B0GW35 172 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 LRRD1A4D1F6 860 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SIGLEC16A6NMB1 481 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 PI4K2BG5E9Z4 385 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 ACKR2O00590 384 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 HOXC6P09630 235 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SSTR3P32745 418 aaPredicted RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CDKN2BP42772 138 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 LACTBP83111 547 aaPredicted RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 TFAMQ00059 246 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CAP1Q01518 475 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 ACAP1Q15027 740 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 PWP2Q15269 919 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 OASLQ15646 514 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SNCBQ16143 134 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SEZ6Q53EL9 994 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 ATF7IP2Q5U623 682 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 KAZNQ674X7 775 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CYB5D1Q6P9G0 228 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 PARP9Q8IXQ6 854 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 THNSL1Q8IYQ7 743 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 RNF149Q8NC42 400 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 MGARPQ8TDB4 240 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 C9orf72Q96LT7 481 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 GPR20Q99678 358 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 FETUBQ9UGM5 382 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SLC24A2Q9UI40 661 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 DNAJC25-GNG10A0A024R161 153 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 FAM47DPA6NHR8 397 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 F8VP50 259 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 NOP56O00567 594 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 ALOX15BO15296 676 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 PRPF4O43172 522 aaKnown RBP eCLIP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 GJB6O95452 261 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 GNRH1P01148 92 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 WEE2P0C1S8 567 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 KRT10P13645 584 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 TSHRP16473 764 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 PSMA2P25787 234 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 ASPAP45381 313 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 TNFAIP2Q03169 654 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 GPS1Q13098 491 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 KYAT1Q16773 422 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 HABP4Q5JVS0 413 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CELF3Q5SZQ8 465 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 RNASEH2BQ5TBB1 312 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 NUGGCQ68CJ6 796 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SPATA21Q7Z572 469 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SRRM1Q8IYB3 904 aaKnown RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CCDC63Q8NA47 563 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 SLC35B2Q8TB61 432 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 MAML1Q92585 1016 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 XYLT2Q9H1B5 865 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 FZD8Q9H461 694 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 FAM124BQ9H5Z6 455 aaPredicted RBP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 PTPRHQ9HD43 1115 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 FGFR1OP2Q9NVK5 253 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 KLHL11Q9NVR0 708 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.66□□□□□ -0.06
HMGCL-203ENST00000374490 CTNNAL1Q9UBT7 734 aa14.66□□□□□ -0.06
HMGCL-203ENST00000374490 RASA4BC9J798 803 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 RASA4O43374 803 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 HBP1O60381 514 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 ATICP31939 592 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 PHBP35232 272 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 PRMT2P55345 433 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 OGDHQ02218 1023 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
HMGCL-203ENST00000374490 ACVR2BQ13705 512 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 ZNF268Q14587 947 aaPredicted RBP14.65□□□□□ -0.06
HMGCL-203ENST00000374490 LRRC14Q15048 493 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 TMED2Q15363 201 aa14.65□□□□□ -0.06
HMGCL-203ENST00000374490 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms