RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 MTF1Q14872 753 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 CFAP221Q4G0U5 840 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 INTS6LQ5JSJ4 861 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 SDHAF4Q5VUM1 108 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 DYMQ7RTS9 669 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 SFR1Q86XK3 245 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 BRSK2Q8IWQ3 736 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 LRRC52Q8N7C0 313 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 C1orf127Q8N9H9 656 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 OSCP1Q8WVF1 389 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 CYP2S1Q96SQ9 504 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 FAM213AQ9BRX8 229 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 LSM14BQ9BX40 385 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 DUSP15Q9H1R2 295 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 TMEM206Q9H813 350 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 DUS2Q9NX74 493 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 GDAP2Q9NXN4 497 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 DDX43Q9NXZ2 648 aaKnown RBP14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 SMC3Q9UQE7 1217 aa14.06□□□□□ -0.16
TRAPPC3-201ENST00000373159 ATG2BQ96BY7 2078 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 GABRDO14764 452 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 TADA3O75528 432 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 ITGB3P05106 788 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 GAP43P17677 238 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 GARTP22102 1010 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 POLR2BP30876 1174 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 MPLP40238 635 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 LHX1P48742 406 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 WNT7BP56706 349 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 KCNA1Q09470 495 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 ZNF77Q15935 545 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 NAIF1Q69YI7 327 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 USP49Q70CQ1 688 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 CSGALNACT2Q8N6G5 542 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 TOP6BLQ8N6T0 577 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 CCDC26Q8TAB7 109 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 EZH1Q92800 747 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 CD101Q93033 1021 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 ATP2A3Q93084 1043 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 DNAJC19Q96DA6 116 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 FUBP3Q96I24 572 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 EPSTI1Q96J88 318 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 ACCSQ96QU6 501 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 SLC22A12Q96S37 553 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 MRPL44Q9H9J2 332 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 STK17AQ9UEE5 414 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 GTF3C4Q9UKN8 822 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 ITGA11Q9UKX5 1188 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 PCDHB13Q9Y5F0 798 aa14.05□□□□□ -0.16
TRAPPC3-201ENST00000373159 ZFHX4Q86UP3 3567 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 MYMKA6NI61 221 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 KCNK5O95279 499 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 CD2BP2O95400 341 aaKnown RBP14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 APBB3O95704 486 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 TCF3P15923 654 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 KCNA4P22459 653 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 RBP5P82980 135 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 NR1H3Q13133 447 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 DMC1Q14565 340 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 ELF2Q15723 593 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 EML3Q32P44 896 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 SCARA3Q6AZY7 606 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 DPH6Q7L8W6 267 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 ZSWIM2Q8NEG5 633 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 RPLP0P6Q8NHW5 317 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 ACDQ96AP0 544 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 SAAL1Q96ER3 474 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 HHIPQ96QV1 700 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 TRPC7Q9HCX4 862 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 CCDC39Q9UFE4 941 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
TRAPPC3-201ENST00000373159 CFAP47Q6ZTR5 3102 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 CKMP06732 381 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 PCSK1P29120 753 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 MAGEA11P43364 429 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 IFNAR2P48551 515 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 USP4Q13107 963 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 RNF43Q68DV7 783 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 SV2BQ7L1I2 683 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 LIMS2Q7Z4I7 341 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 OSTM1Q86WC4 334 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 SPATA2LQ8IUW3 424 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 ARL14EPQ8N8R7 260 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 CEP295NLQ96MC4 621 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 LINC00597Q9H2U6 94 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 SMOC1Q9H4F8 434 aa14.03□□□□□ -0.16
TRAPPC3-201ENST00000373159 OLFML3Q9NRN5 406 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms