RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 SPDYE16A6NNV3 312 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 KRT4P19013 534 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 UBA1P22314 1058 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 ALDH3A1P30838 453 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 STAT5BP51692 787 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 EFNA5P52803 228 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 GPX6P59796 221 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 TFAMQ00059 246 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 ZNF699Q32M78 642 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 EFHC2Q5JST6 749 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 KCNT1Q5JUK3 1230 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 TLDC1Q6P9B6 456 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 PPIL6Q8IXY8 311 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 NSMCE1Q8WV22 266 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 RSRC1Q96IZ7 334 aaKnown RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 RAB3IPQ96QF0 476 aaPredicted RBP20.11■□□□□ 0.81
TMEM53-202ENST00000372237 HOXC10Q9NYD6 342 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 CHKBQ9Y259 395 aa20.11■□□□□ 0.81
TMEM53-202ENST00000372237 C3orf70A6NLC5 250 aaPredicted RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 CST8O60676 142 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 ATP5HO75947 161 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 KRT3P12035 628 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 SSTR1P30872 391 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 POLR2BP30876 1174 aaKnown RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 GDF10P55107 478 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 ARL4CP56559 192 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 TFDP1Q14186 410 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 LVRNQ6Q4G3 990 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 APOBEC3FQ8IUX4 373 aaKnown RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 UPF1Q92900 1129 aaKnown RBP eCLIP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 C10orf88Q9H8K7 445 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 RABGEF1Q9UJ41 708 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 C15orf41Q9Y2V0 281 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 OGTO15294 1046 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 MAFO75444 373 aaPredicted RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 DCTN3O75935 186 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 FARP2O94887 1054 aaPredicted RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 KRT7P08729 469 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 SLC25A11Q02978 314 aaKnown RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 GAD2Q05329 585 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 HADHQ16836 314 aaKnown RBP20.1■□□□□ 0.81
TMEM53-202ENST00000372237 RHPN2Q8IUC4 686 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 ATP11CQ8NB49 1132 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 TTC13Q8NBP0 860 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 RSAD2Q8WXG1 361 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 CPT1BQ92523 772 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 EFR3BQ9Y2G0 817 aa20.1■□□□□ 0.81
TMEM53-202ENST00000372237 CLUHO75153 1309 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 LRCH4O75427 683 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 SRGAP2CP0DJJ0 459 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 CD19P15391 556 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 SURF1Q15526 300 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 PTPN20Q4JDL3 420 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 ANKRD22Q5VYY1 191 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 ACO2Q99798 780 aaKnown RBP20.09■□□□□ 0.81
TMEM53-202ENST00000372237 TARSP26639 723 aaKnown RBP20.09■□□□□ 0.81
TMEM53-202ENST00000372237 IL1R2P27930 398 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 ASPAP45381 313 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 HIRAP54198 1017 aaPredicted RBP20.09■□□□□ 0.81
TMEM53-202ENST00000372237 EFTUD2Q15029 972 aaKnown RBP eCLIP20.09■□□□□ 0.81
TMEM53-202ENST00000372237 FNBP1LQ5T0N5 605 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 FAM160B1Q5W0V3 765 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 DENND1BQ6P3S1 775 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 C3orf62Q6ZUJ4 267 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 GPC2Q8N158 579 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 TAB3Q8N5C8 712 aaPredicted RBP20.09■□□□□ 0.81
TMEM53-202ENST00000372237 JOSD2Q8TAC2 188 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 MAF1Q9H063 256 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 SNCAIPQ9Y6H5 919 aa20.09■□□□□ 0.81
TMEM53-202ENST00000372237 SIGLEC16A6NMB1 481 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 ZWINTO95229 277 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 SEPT7Q16181 437 aaKnown RBP20.08■□□□□ 0.81
TMEM53-202ENST00000372237 MSS51Q4VC12 460 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 DHX37Q8IY37 1157 aaKnown RBP20.08■□□□□ 0.81
TMEM53-202ENST00000372237 NAT8LQ8N9F0 302 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 FRMD8P1Q9BZ68 369 aaPredicted RBP20.08■□□□□ 0.81
TMEM53-202ENST00000372237 PHACTR1Q9C0D0 580 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 NXF1Q9UBU9 619 aaKnown RBP20.08■□□□□ 0.81
TMEM53-202ENST00000372237 TJP2Q9UDY2 1190 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 FETUBQ9UGM5 382 aa20.08■□□□□ 0.81
TMEM53-202ENST00000372237 CPSF3Q9UKF6 684 aaKnown RBP20.08■□□□□ 0.81
TMEM53-202ENST00000372237 PIAS1O75925 651 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 PRKCBP05771 671 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 KDELR1P24390 212 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 TCF7P36402 384 aaPredicted RBP20.08■□□□□ 0.8
TMEM53-202ENST00000372237 YWHAEP62258 255 aaKnown RBP20.08■□□□□ 0.8
TMEM53-202ENST00000372237 MAPK6Q16659 721 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 BBS12Q6ZW61 710 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 ARFGAP1Q8N6T3 406 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 RNF149Q8NC42 400 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 FBXO36Q8NEA4 188 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 ZNF75CPQ92670 426 aaPredicted RBP20.08■□□□□ 0.8
TMEM53-202ENST00000372237 TMEM237Q96Q45 408 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 PAFAH2Q99487 392 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 LRMDAQ9H2I8 198 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 SSU72Q9NP77 194 aaKnown RBP20.08■□□□□ 0.8
TMEM53-202ENST00000372237 GGA3Q9NZ52 723 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 HAO1Q9UJM8 370 aa20.08■□□□□ 0.8
TMEM53-202ENST00000372237 RPL22P35268 128 aaKnown RBP20.07■□□□□ 0.8
TMEM53-202ENST00000372237 CLNS1AP54105 237 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms