RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PTPRHQ9HD43 1115 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 NUB1Q9Y5A7 615 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 KAT6AQ92794 2004 aa14.92□□□□□ -0.02
LDB3-204ENST00000372066 MYO1FO00160 1098 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 C22orf31O95567 290 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 TMEM191BP0C7N4 346 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 HARSP12081 509 aaKnown RBP14.91□□□□□ -0.02
LDB3-204ENST00000372066 GUCY2FP51841 1108 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
LDB3-204ENST00000372066 TRPC3Q13507 836 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 ZNF568Q3ZCX4 644 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 TMEM31Q5JXX7 168 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 NAA35Q5VZE5 725 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 DUPD1Q68J44 220 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 SPOPLQ6IQ16 392 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 EFCAB12Q6NXP0 572 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 LRRC71Q8N4P6 559 aa14.91□□□□□ -0.02
LDB3-204ENST00000372066 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.91□□□□□ -0.02
LDB3-204ENST00000372066 MRPL38Q96DV4 380 aaKnown RBP14.91□□□□□ -0.02
LDB3-204ENST00000372066 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 THAP12O43422 761 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 PSTPIP1O43586 416 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 CALB1P05937 261 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 MARCKSL1P49006 195 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 GYS2P54840 703 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 MBTD1Q05BQ5 628 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 GPM6BQ13491 265 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 LEXMQ3ZCV2 418 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 PLEKHA7Q6IQ23 1121 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 PRELID2Q8N945 189 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 APBB2Q92870 758 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 SLCO2A1Q92959 643 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 FAM124BQ9H5Z6 455 aaPredicted RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 ADAM22Q9P0K1 906 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 CITO14578 2027 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 HMGB1P1B2RPK0 211 aaPredicted RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 INO80B-WBP1J3KQ70 363 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 FSCN2O14926 492 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 DAPK3O43293 454 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 PROSCO94903 275 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 MCF2P10911 925 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 PYGMP11217 842 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 RRM1P23921 792 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 TMOD1P28289 359 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 ACTN2P35609 894 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 PLA2G5P39877 138 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 TNFSF9P41273 254 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 FAM26DQ5JW98 314 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 SYDE1Q6ZW31 735 aaPredicted RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 TMEM192Q8IY95 271 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 LINC01465Q8N7H1 131 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 RIN2Q8WYP3 895 aaPredicted RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
LDB3-204ENST00000372066 MAGOHBQ96A72 148 aaKnown RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 CYFIP2Q96F07 1278 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 NLRP4Q96MN2 994 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 FMO2Q99518 471 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 INO80BQ9C086 356 aaPredicted RBP14.9□□□□□ -0.02
LDB3-204ENST00000372066 MTMR12Q9C0I1 747 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 ERVK-5Q9HDB9 667 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 CD320Q9NPF0 282 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 HOMER3Q9NSC5 361 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 CALCOCO1Q9P1Z2 691 aa14.9□□□□□ -0.02
LDB3-204ENST00000372066 NRCAMQ92823 1304 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 H3BNC9 293 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 SHOX2O60902 331 aaPredicted RBP14.89□□□□□ -0.03
LDB3-204ENST00000372066 IVLP07476 585 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 CDH5P33151 784 aaPredicted RBP14.89□□□□□ -0.03
LDB3-204ENST00000372066 PTGIRP43119 386 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 EIF3BP55884 814 aaKnown RBP14.89□□□□□ -0.03
LDB3-204ENST00000372066 ADAM17P78536 824 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 SKOR1P84550 965 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 TMEM132AQ24JP5 1023 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 CCDC137Q6PK04 289 aaKnown RBP14.89□□□□□ -0.03
LDB3-204ENST00000372066 RUFY4Q6ZNE9 571 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 TMC3Q7Z5M5 1100 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 TMEM35BQ8NCS4 154 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 ZNF606Q8WXB4 792 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 CPA5Q8WXQ8 436 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 PIK3R5Q8WYR1 880 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 CELF4Q9BZC1 486 aaKnown RBP14.89□□□□□ -0.03
LDB3-204ENST00000372066 CDT1Q9H211 546 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 LRRC19Q9H756 370 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 RPF1Q9H9Y2 349 aaKnown RBP14.89□□□□□ -0.03
LDB3-204ENST00000372066 PARVAQ9NVD7 372 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
LDB3-204ENST00000372066 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 PPFIA2O75334 1257 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 CHRNA1P02708 482 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 GHRP10912 638 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 MMP8P22894 467 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 HSD17B3P37058 310 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 COILP38432 576 aaPredicted RBP14.88□□□□□ -0.03
LDB3-204ENST00000372066 CLCN3P51790 818 aa14.88□□□□□ -0.03
LDB3-204ENST00000372066 ZNF699Q32M78 642 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms