RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CDC73Q6P1J9 531 aa15.83■□□□□ 0.13
COL5A1-201ENST00000371817 STK36Q9NRP7 1315 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 F8W810 466 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 FAM98BQ52LJ0 330 aaKnown RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 CELF4Q9BZC1 486 aaKnown RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 M0QYV0 167 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 MTERF2Q49AM1 385 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 SPICE1Q8N0Z3 855 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 TSPAN18Q96SJ8 248 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 FAM129BQ96TA1 746 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 KCTD14Q9BQ13 255 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 ADD3Q9UEY8 706 aaKnown RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 GNPATO15228 680 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 CYP2D6P10635 497 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 TNFAIP2Q03169 654 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 CYP4Z1Q86W10 505 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 THEM5Q8N1Q8 247 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 AMER2Q8N7J2 671 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 ELOVL6Q9H5J4 265 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 PAK5Q9P286 719 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 TSPAN4O14817 238 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 NR1I3Q14994 352 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 EAPPQ56P03 285 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 TBCELQ5QJ74 424 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 DDI2Q5TDH0 399 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 AGAP3Q96P47 875 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 PNKPQ96T60 521 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 LATS2Q9NRM7 1088 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 TRIM10Q9UDY6 481 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 POTECB2RU33 542 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 SYNCRIPO60506 623 aaKnown RBP15.83■□□□□ 0.12
COL5A1-201ENST00000371817 ACLYP53396 1101 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 NAB2Q15742 525 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 NYAP1Q6ZVC0 841 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 POC5Q8NA72 575 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 ABCB10Q9NRK6 738 aa15.83■□□□□ 0.12
COL5A1-201ENST00000371817 CLOCKO15516 846 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 STX11O75558 287 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 KRT36O76013 467 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 PRMT9Q6P2P2 845 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 GPD1LQ8N335 351 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF333Q96JL9 665 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 DYRK4Q9NR20 520 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 RGS4P49798 205 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 POU4F1Q01851 419 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 QPRTQ15274 297 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 RBM46Q8TBY0 533 aaKnown RBP15.82■□□□□ 0.12
COL5A1-201ENST00000371817 TMEM120AQ9BXJ8 343 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 GOLPH3Q9H4A6 298 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 MLXQ9UH92 298 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 LOC100506127A0A0U1RQW1 187 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 LARGE1O95461 756 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 POU1F1P28069 291 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF235Q14590 738 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 TRIM74Q86UV6 250 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 TRIM73Q86UV7 250 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 LRRC17Q8N6Y2 441 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 DGCR14Q96DF8 476 aaKnown RBP15.82■□□□□ 0.12
COL5A1-201ENST00000371817 STK33Q9BYT3 514 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 ZSWIM5Q9P217 1185 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 MOSPD1Q9UJG1 213 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 FYNP06241 537 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 POLD3Q15054 466 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-201ENST00000371817 GUF1Q8N442 669 aaKnown RBP15.82■□□□□ 0.12
COL5A1-201ENST00000371817 LRRC71Q8N4P6 559 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 KCNB2Q92953 911 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 CCNA2P20248 432 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 MTFR1Q15390 333 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 EXOC3L1Q86VI1 746 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 SNX31Q8N9S9 440 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 CCDC17Q96LX7 622 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 FRMD8Q9BZ67 464 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-201ENST00000371817 ATG7O95352 703 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 AQP5P55064 265 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 EPS8L3Q8TE67 593 aaKnown RBP15.82■□□□□ 0.12
COL5A1-201ENST00000371817 RAD54LQ92698 747 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF180Q9UJW8 692 aa15.82■□□□□ 0.12
COL5A1-201ENST00000371817 PVALEFA0A1B0GWK0 134 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 BTN3A2P78410 334 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 DLGAP5Q15398 846 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 ZFP69Q49AA0 526 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 PPIL6Q8IXY8 311 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 ADSSL1Q8N142 457 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 CSADQ9Y600 493 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.81■□□□□ 0.12
COL5A1-201ENST00000371817 AXIN1O15169 862 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 SEC24AO95486 1093 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 HSF2Q03933 536 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 SH3TC2Q8TF17 1288 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 DGCR6LQ9BY27 220 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 E2F8A0AVK6 867 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 GNB5O14775 395 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 BCAMP50895 628 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 RAB25P57735 213 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 UBXN2AP68543 259 aa15.81■□□□□ 0.12
COL5A1-201ENST00000371817 ZNF544Q6NX49 715 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms