RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SCUBE1Q8IWY4 988 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 ADSSL1Q8N142 457 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 NME8Q8N427 588 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 OR6J1Q8NGC5 347 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 ATP8B4Q8TF62 1192 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 JPH3Q8WXH2 748 aaPredicted RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 KAT2BQ92831 832 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 GLG1Q92896 1179 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 ZBTB10Q96DT7 871 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CEP170P1Q96L14 293 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 FIZ1Q96SL8 496 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 HSD3B7Q9H2F3 369 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CARS2Q9HA77 564 aaKnown RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 GPRC5CQ9NQ84 441 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CYP26B1Q9NR63 512 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 NRBP2Q9NSY0 501 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 EXOC1Q9NV70 894 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 RMND1Q9NWS8 449 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 NRBP1Q9UHY1 535 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 EMSYQ7Z589 1322 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CENPFP49454 3210 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 VSTM5A8MXK1 200 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CBFA2T2O43439 604 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 DKC1O60832 514 aaKnown RBP eCLIP3.89□□□□□ -1.79
MCF2-202ENST00000370573 DUSP11O75319 330 aaKnown RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 ZNF286BP0CG31 522 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 PABPC1P11940 636 aaKnown RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 AKR1A1P14550 325 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 ZSCAN20P17040 1043 aaPredicted RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 NMT1P30419 496 aaKnown RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 HOXD13P35453 343 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 PMS1P54277 932 aaKnown RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 STX17P56962 302 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 BEX3Q00994 111 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 TRIM61Q5EBN2 209 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 FAM26FQ5R3K3 315 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 EPM2AIP1Q7L775 607 aaPredicted RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 OTUD6AQ7L8S5 288 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 TLK2Q86UE8 772 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CCDC65Q8IXS2 484 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 PPM1KQ8N3J5 372 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 AOPEPQ8N6M6 819 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 PPP1R13LQ8WUF5 828 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 TRAPPC12Q8WVT3 735 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 BPIFA3Q9BQP9 254 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 AARSD1Q9BTE6 412 aaKnown RBP3.89□□□□□ -1.79
MCF2-202ENST00000370573 ZHX3Q9H4I2 956 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 SMARCAD1Q9H4L7 1026 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 AZI2Q9H6S1 392 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 GRPEL1Q9HAV7 217 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 PTPRHQ9HD43 1115 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 SEMA3GQ9NS98 782 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 KCND2Q9NZV8 630 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 TAGLN3Q9UI15 199 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 Q9Y3F1 56 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 ST14Q9Y5Y6 855 aa3.89□□□□□ -1.79
MCF2-202ENST00000370573 CASP8AP2Q9UKL3 1982 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 IGKV6-21A0A0C4DH24 114 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 SEPT4O43236 478 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 PRODHO43272 600 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 LRRN2O75325 713 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 TBCAO75347 108 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 MAFO75444 373 aaPredicted RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 CAVIN2O95810 425 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 PGK1P00558 417 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 HMGCRP04035 888 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 MYBP10242 640 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 INSRRP14616 1297 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 GAP43P17677 238 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 CLCN7P51798 805 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 GJA9P57773 515 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 NKX3-2P78367 333 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 DRP2Q13474 957 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 SF1Q15637 639 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 FSCN1Q16658 493 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 DGKDQ16760 1214 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 COBLL1Q53SF7 1204 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 IL31Q6EBC2 164 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 KLHL10Q6JEL2 608 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 SLC23A3Q6PIS1 610 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 ZBTB46Q86UZ6 589 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 ZNF227Q86WZ6 799 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 PASD1Q8IV76 773 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 KSR1Q8IVT5 923 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 MYCT1Q8N699 235 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 ENOX1Q8TC92 643 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 RAET1EQ8TD07 263 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 SCFD1Q8WVM8 642 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 NELFBQ8WX92 580 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 CCDC47Q96A33 483 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 TMEM143Q96AN5 459 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 STRA6Q9BX79 667 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 ZNF700Q9H0M5 742 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 AP5M1Q9H0R1 490 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 UPF3AQ9H1J1 476 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 IKZF4Q9H2S9 585 aa3.88□□□□□ -1.79
MCF2-202ENST00000370573 DHX33Q9H6R0 707 aaKnown RBP3.88□□□□□ -1.79
MCF2-202ENST00000370573 BCCIPQ9P287 314 aaKnown RBP eCLIP3.88□□□□□ -1.79
MCF2-202ENST00000370573 NDOR1Q9UHB4 597 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms