RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
LRIF1-201ENST00000369763 PEX11AO75192 247 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 STBD1O95210 358 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 TOP3BO95985 862 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PYGBP11216 843 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 KRT3P12035 628 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 CCNB1P14635 433 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 RPL22P35268 128 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 CDKN2BP42772 138 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 BMPR2Q13873 1038 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 KHDC1Q4VXA5 237 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 NIPA1Q7RTP0 329 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 WDTC1Q8N5D0 677 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 UBA3Q8TBC4 463 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 C10orf82Q8WW14 230 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 FAXDC2Q96IV6 333 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 WDR83Q9BRX9 315 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 MYOZ2Q9NPC6 264 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 E2F8A0AVK6 867 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PMM2O15305 246 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 LPXNO60711 386 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 MT-ND3P03897 115 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PTDSS1P48651 473 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 MUM1Q2TAK8 710 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 ZNF677Q86XU0 584 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 NIM1KQ8IY84 436 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PPM1NQ8N819 430 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 MIPEPQ99797 713 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 ASCC2Q9H1I8 757 aaPredicted RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 RABGEF1Q9UJ41 708 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 FAM237BA0A1B0GVD1 139 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 ALADP13716 330 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 ELK3P41970 407 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 SNRPFP62306 86 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 LMNB2Q03252 620 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 FAAP100Q0VG06 881 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 KBTBD12Q3ZCT8 623 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PTPN20Q4JDL3 420 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PHF13Q86YI8 300 aaPredicted RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 VPS52Q8N1B4 723 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 PRPF31Q8WWY3 499 aaKnown RBP11.43□□□□□ -0.58
LRIF1-201ENST00000369763 WRNIP1Q96S55 665 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 RNPEPL1Q9HAU8 725 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 CYTH4Q9UIA0 394 aa11.43□□□□□ -0.58
LRIF1-201ENST00000369763 ALOX15BO15296 676 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TCEA3O75764 348 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 DCTN3O75935 186 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 KRT36O76013 467 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 RBP3P10745 1247 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 ARL4CP56559 192 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TMEM132BQ14DG7 1078 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 MORF4L2Q15014 288 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 OASLQ15646 514 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 CLNKQ7Z7G1 428 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 ALYREFQ86V81 257 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 RNF149Q8NC42 400 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 SPATA18Q8TC71 538 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 MCUR1Q96AQ8 359 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 GRAMD1AQ96CP6 724 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 SERAC1Q96JX3 654 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 GMLQ99445 158 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TIPINQ9BVW5 301 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 MANSC1Q9H8J5 431 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 HMGXB4Q9UGU5 601 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 LY75O60449 1722 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 H7C0C1 242 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 INO80B-WBP1J3KQ70 363 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 CYB561D2O14569 222 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 B4GALT5O43286 388 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TYROBPO43914 113 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 LRCH4O75427 683 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TROVE2P10155 538 aaKnown RBP eCLIP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 ATP5OP48047 213 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TUBP50607 506 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 EIF3EP60228 445 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 KDSRQ06136 332 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 CAPSQ13938 189 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 KPNB1Q14974 876 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 ZNF699Q32M78 642 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 GNPTABQ3T906 1256 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 XKR3Q5GH77 459 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 DARS2Q6PI48 645 aaKnown RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 ARFGAP1Q8N6T3 406 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 TSSK1BQ9BXA7 367 aa11.42□□□□□ -0.58
LRIF1-201ENST00000369763 INO80BQ9C086 356 aaPredicted RBP11.42□□□□□ -0.58
LRIF1-201ENST00000369763 KBTBD13C9JR72 458 aa11.41□□□□□ -0.58
LRIF1-201ENST00000369763 GYG2O15488 501 aa11.41□□□□□ -0.58
LRIF1-201ENST00000369763 UGT1A9O60656 530 aa11.41□□□□□ -0.58
LRIF1-201ENST00000369763 ZC3H11AO75152 810 aaKnown RBP eCLIP11.41□□□□□ -0.582e-11■■□□□ 14.2
LRIF1-201ENST00000369763 TPBGLP0DKB5 382 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms