RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 SLC2A14Q8TDB8 520 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PGBD4Q96DM1 585 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 HERPUD2Q9BSE4 406 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 AP1M1Q9BXS5 423 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 RAB6CQ9H0N0 254 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 SNX25Q9H3E2 840 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 FAM124BQ9H5Z6 455 aaPredicted RBP14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 CRTAC1Q9NQ79 661 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 DNAJB4Q9UDY4 337 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 ZNF638Q14966 1978 aaKnown RBP14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 TCRBV7S2A1N4TA0A589 114 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 SPOPO43791 374 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PROSCO94903 275 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PYGMP11217 842 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 CTNNA1P35221 906 aaKnown RBP14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 LBX1P52954 281 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PDE4CQ08493 712 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 BFSP2Q13515 415 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 TAF5Q15542 800 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 TXNRD3NBQ6F5E7 133 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 SMYD5Q6GMV2 418 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 ARFGAP1Q8N6T3 406 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 C3orf20Q8ND61 904 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PLEKHA4Q9H4M7 779 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 TMEM30AQ9NV96 361 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 TMEM59LQ9UK28 342 aa14.91□□□□□ -0.02
HMGCS2-201ENST00000369406 PTPRSQ13332 1948 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 ALPK3Q96L96 1907 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 F8VP50 259 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 BEST1O76090 585 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 GABRB2P47870 512 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 TUSC3Q13454 348 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CFAP221Q4G0U5 840 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CCDC181Q5TID7 509 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 ARHGAP17Q68EM7 881 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 FAM183BPQ6ZVS7 135 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 ADAT2Q7Z6V5 191 aaKnown RBP14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 FUKQ8N0W3 1084 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CRIPAKQ8N1N5 446 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 TTC39CQ8N584 583 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CLEC4CQ8WTT0 213 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 SLC35F5Q8WV83 523 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 PBKQ96KB5 322 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 RNPC3Q96LT9 517 aaKnown RBP14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 B3GNT5Q9BYG0 378 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 PARD6BQ9BYG5 372 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 HIPK3Q9H422 1215 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 ST7Q9NRC1 585 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 METTL5Q9NRN9 209 aaKnown RBP14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 USTQ9Y2C2 406 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CEP83Q9Y592 693 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 LTBP2Q14767 1821 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 MYO1FO00160 1098 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CES2O00748 559 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 ZMYND10O75800 440 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 H2AFXP16104 143 aaPredicted RBP14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 CTNNA2P26232 953 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 B3GALNT2Q8NCR0 500 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 ACTRT1Q8TDG2 376 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 C18orf8Q96DM3 657 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 LRRC1Q9BTT6 524 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 TBC1D13Q9NVG8 400 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 KIAA1257Q9ULG3 409 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 PCDHA3Q9Y5H8 950 aa14.9□□□□□ -0.02
HMGCS2-201ENST00000369406 B3GAT3O94766 335 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 ITGB8P26012 769 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 CACNA2D1P54289 1103 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 DSC1Q08554 894 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 ATP13A4Q4VNC1 1196 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 FBXO46Q6PJ61 603 aaPredicted RBP14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 DEFB128Q7Z7B8 93 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 MSANTD4Q8NCY6 345 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 KHSRPQ92945 711 aaKnown RBP eCLIP14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 ARMC5Q96C12 935 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 MCRS1Q96EZ8 462 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 DDX27Q96GQ7 796 aaKnown RBP14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 TMEM209Q96SK2 561 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 RHOBTB2Q9BYZ6 727 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 KLHL11Q9NVR0 708 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 DDX43Q9NXZ2 648 aaKnown RBP14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 PRDM4Q9UKN5 801 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 SCINQ9Y6U3 715 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 PATJQ8NI35 1801 aa14.89□□□□□ -0.03
HMGCS2-201ENST00000369406 MYBPHLA2RUH7 354 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 GRAP2O75791 330 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 EOMESO95936 686 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 FGGP02679 453 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 RPL9P32969 192 aaKnown RBP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 MDH1BQ5I0G3 518 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 DSTYKQ6XUX3 929 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 MMGT1Q8N4V1 131 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 SLC4A5Q9BY07 1137 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 MRPL47Q9HD33 250 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms