RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 NCF1P14598 390 aaPredicted RBP18.65■□□□□ 0.58
SNX27-203ENST00000368843 CLCN3P51790 818 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 XRRA1Q6P2D8 792 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 ADGRF2Q8IZF7 708 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 VMP1Q96GC9 406 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 SMG5Q9UPR3 1016 aaKnown RBP18.65■□□□□ 0.58
SNX27-203ENST00000368843 AIM2O14862 343 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 FOXP2O15409 715 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 MAP3K7CLP57077 242 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 NAB2Q15742 525 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 CNGA3Q16281 694 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 RABGAP1LQ5R372 815 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 DEPDC1Q5TB30 811 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 NAPEPLDQ6IQ20 393 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 ACOT1Q86TX2 421 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 INPP5DQ92835 1189 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 SYNCRIPO60506 623 aaKnown RBP18.65■□□□□ 0.58
SNX27-203ENST00000368843 CHN1P15882 459 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 C16orf89Q6UX73 402 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 SPATA31A5Q5VU36 1347 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 SPATA31A7Q8IWB4 1347 aa18.65■□□□□ 0.58
SNX27-203ENST00000368843 KRT8P05787 483 aa18.64■□□□□ 0.58
SNX27-203ENST00000368843 GSNP06396 782 aa18.64■□□□□ 0.58
SNX27-203ENST00000368843 SLC2A3P11169 496 aa18.64■□□□□ 0.58
SNX27-203ENST00000368843 ACO1P21399 889 aaKnown RBP18.64■□□□□ 0.58
SNX27-203ENST00000368843 SLC16A1P53985 500 aa18.64■□□□□ 0.58
SNX27-203ENST00000368843 SFSWAPQ12872 951 aaKnown RBP18.64■□□□□ 0.58
SNX27-203ENST00000368843 GALNT4Q8N4A0 578 aa18.64■□□□□ 0.58
SNX27-203ENST00000368843 ZNF669Q96BR6 464 aaPredicted RBP18.64■□□□□ 0.58
SNX27-203ENST00000368843 SENP2Q9HC62 589 aa18.64■□□□□ 0.58
SNX27-203ENST00000368843 DARSP14868 501 aaKnown RBP18.64■□□□□ 0.57
SNX27-203ENST00000368843 KLRK1P26718 216 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 ALDH6A1Q02252 535 aaKnown RBP18.64■□□□□ 0.57
SNX27-203ENST00000368843 CCDC159P0C7I6 412 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 RPA1P27694 616 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 KCNK10P57789 538 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 CDC16Q13042 620 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 CUL2Q13617 745 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 CLEC16AQ2KHT3 1053 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 TRIM60Q495X7 471 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 WNK4Q96J92 1243 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 RNF112Q9ULX5 631 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 VWA5AO00534 786 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 EPHB3P54753 998 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 ZNF484Q5JVG2 852 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 BARGINQ6ZT62 677 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 LINC00523Q86TU6 105 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 DDI1Q8WTU0 396 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 ZNF677Q86XU0 584 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 KIF2CQ99661 725 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 CAMSAP1Q5T5Y3 1602 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 RGL2O15211 777 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 KRT16P08779 473 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 CDH2P19022 906 aaPredicted RBP18.64■□□□□ 0.57
SNX27-203ENST00000368843 CAP2P40123 477 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 PLCL1Q15111 1095 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 ANKS6Q68DC2 871 aa18.64■□□□□ 0.57
SNX27-203ENST00000368843 CSF1RP07333 972 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 MYL4P12829 197 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 PCYOX1LQ8NBM8 494 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 CASTOR2A6NHX0 329 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 MSH4O15457 936 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 VCLP18206 1134 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 MROH9Q5TGP6 573 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 LVRNQ6Q4G3 990 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 CATSPER1Q8NEC5 780 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 OR2W6PQ8NHA6 318 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 RUSC1Q9BVN2 902 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 KCTD10Q9H3F6 313 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 GBA2Q9HCG7 927 aaPredicted RBP18.63■□□□□ 0.57
SNX27-203ENST00000368843 GAS2O43903 313 aaKnown RBP18.63■□□□□ 0.57
SNX27-203ENST00000368843 ANXA9O76027 345 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 FXR2P51116 673 aaKnown RBP eCLIP18.63■□□□□ 0.57
SNX27-203ENST00000368843 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 USP42Q9H9J4 1324 aaKnown RBP18.63■□□□□ 0.57
SNX27-203ENST00000368843 ABCA6Q8N139 1617 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 HOXA2O43364 376 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 CHI3L1P36222 383 aaPredicted RBP18.63■□□□□ 0.57
SNX27-203ENST00000368843 ITGA8P53708 1063 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 LAYNQ6UX15 382 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 MIER2Q8N344 545 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 KLF6Q99612 283 aaPredicted RBP18.63■□□□□ 0.57
SNX27-203ENST00000368843 COPS7BQ9H9Q2 264 aaPredicted RBP18.63■□□□□ 0.57
SNX27-203ENST00000368843 RIC8BQ9NVN3 520 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 CNTNAP4Q9C0A0 1308 aa18.63■□□□□ 0.57
SNX27-203ENST00000368843 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
SNX27-203ENST00000368843 PHACTR4Q8IZ21 702 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 ZNF512BQ96KM6 892 aaPredicted RBP18.62■□□□□ 0.57
SNX27-203ENST00000368843 GPR75-ASB3A0A0A6YYF3 556 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 EFEMP1Q12805 493 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 ADCK1Q86TW2 530 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 LONP2Q86WA8 852 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 PARP9Q8IXQ6 854 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 DIS3LQ8TF46 1054 aaKnown RBP18.62■□□□□ 0.57
SNX27-203ENST00000368843 PAWRQ96IZ0 340 aaKnown RBP18.62■□□□□ 0.57
SNX27-203ENST00000368843 PRMT6Q96LA8 375 aaPredicted RBP18.62■□□□□ 0.57
SNX27-203ENST00000368843 TRIM16O95361 564 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 AGTP01019 485 aa18.62■□□□□ 0.57
SNX27-203ENST00000368843 DDX39BQ13838 428 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms