RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TRBV23-1A0A0A0MS06 115 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 GOLGA6L9A6NEM1 432 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 N4BP1O75113 896 aaKnown RBP9.42□□□□□ -0.9
TPM3-213ENST00000368545 PIGRP01833 764 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 MMP3P08254 477 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 EPHA1P21709 976 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 EFNA5P52803 228 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 NKX3-2P78367 333 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 TNFAIP2Q03169 654 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 MEA1Q16626 185 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 E4F1Q66K89 784 aaPredicted RBP9.42□□□□□ -0.9
TPM3-213ENST00000368545 USP37Q86T82 979 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 BICD1Q96G01 975 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 C2orf40Q9H1Z8 148 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 FAM86C1Q9NVL1 165 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 ZIM2Q9NZV7 527 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 CEP72Q9P209 647 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 EVPLQ92817 2033 aa9.42□□□□□ -0.9
TPM3-213ENST00000368545 KIF2AO00139 706 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 MAGEB2O15479 319 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ASAP2O43150 1006 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 CREB3O43889 395 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ATP2A2P16615 1042 aaKnown RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 NBL1P41271 181 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 KLK7P49862 253 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 LIG4P49917 911 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 CDK17Q00537 523 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 CAPSQ13938 189 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 TFDP1Q14186 410 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 EXOC3L4Q17RC7 722 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 TIGD5Q53EQ6 642 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 TMEM63BQ5T3F8 832 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 CDCA2Q69YH5 1023 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 GBP6Q6ZN66 633 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 CACNA2D4Q7Z3S7 1137 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ZBTB8OSQ8IWT0 167 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 C17orf53Q8N3J3 647 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 FBXL6Q8N531 539 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 TRPV1Q8NER1 839 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 CBWD1Q9BRT8 395 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 LSM14BQ9BX40 385 aaKnown RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 IKZF4Q9H2S9 585 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 KIAA1586Q9HCI6 787 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 FAM207AQ9NSI2 230 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 AGPAT5Q9NUQ2 364 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 NAGPAQ9UK23 515 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 FBXL5Q9UKA1 691 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 Q9Y3F1 56 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 K7ERI5 159 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ARVCFO00192 962 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 AGRPO00253 132 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 P4HA2O15460 535 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 BAIAP3O94812 1187 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 TUBB4AP04350 444 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ZNF865P0CJ78 1059 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 HNRNPH3P31942 346 aaKnown RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 CETN1Q12798 172 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 PCSK7Q16549 785 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 SLFN12LQ6IEE8 588 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 C16orf59Q7L2K0 433 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ATOH1Q92858 354 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 SMAD5Q99717 465 aaKnown RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 C16orf70Q9BSU1 422 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 SMG9Q9H0W8 520 aaKnown RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
TPM3-213ENST00000368545 ATXN7L1Q9ULK2 861 aaPredicted RBP9.41□□□□□ -0.9
TPM3-213ENST00000368545 TRAV20A0A0B4J274 112 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 CHURC1-FNTBB4DL54 471 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 RNF225M0QZC1 329 aaPredicted RBP9.4□□□□□ -0.9
TPM3-213ENST00000368545 AKAP10O43572 662 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 OFD1O75665 1012 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 C22orf31O95567 290 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 CCDC175P0C221 793 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 ZNF286BP0CG31 522 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 TMOD1P28289 359 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 ADSSP30520 456 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 FMO5P49326 533 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 CPT1AP50416 773 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 VAMP7P51809 220 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 NEK2P51955 445 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 ACLYP53396 1101 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 POU5F1BQ06416 359 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 PUM1Q14671 1186 aaKnown RBP eCLIP9.4□□□□□ -0.91e-11■■□□□ 11.7
TPM3-213ENST00000368545 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.9
TPM3-213ENST00000368545 HDXQ7Z353 690 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 SYT9Q86SS6 491 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 TLK2Q86UE8 772 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 GPD1LQ8N335 351 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 CCDC155Q8N6L0 562 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 PRPF31Q8WWY3 499 aaKnown RBP9.4□□□□□ -0.9
TPM3-213ENST00000368545 SYN2Q92777 582 aaPredicted RBP9.4□□□□□ -0.9
TPM3-213ENST00000368545 NFKBIZQ9BYH8 718 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 RNPEPQ9H4A4 650 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 SUGCTQ9HAC7 445 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms