RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RANBP2P49792 3224 aaKnown RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 DIAPH2O60879 1101 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 SNUPNO95149 360 aaKnown RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 RFX1P22670 979 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ASPAP45381 313 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ADAM17P78536 824 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ELF3P78545 371 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 UAP1Q16222 522 aaPredicted RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 NOTUMQ6P988 496 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 SLC27A1Q6PCB7 646 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 SPATS2Q86XZ4 545 aaKnown RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 UBL4BQ8N7F7 174 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ZNF606Q8WXB4 792 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 ALG3Q92685 438 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 MAGOHBQ96A72 148 aaKnown RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 RAB17Q9H0T7 212 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 TMBIM4Q9HC24 238 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 FAM114A2Q9NRY5 505 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 KLHL11Q9NVR0 708 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 STXBP5LQ9Y2K9 1186 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 PTPN22Q9Y2R2 807 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 MROH7Q68CQ1 1323 aa11.25□□□□□ -0.61
TPM3-212ENST00000368533 KIAA0100Q14667 2235 aaKnown RBP11.25□□□□□ -0.61
TPM3-212ENST00000368533 MAGOHP61326 146 aaKnown RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 ZNF844Q08AG5 666 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ZC3H12AQ5D1E8 599 aaKnown RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 CCDC25Q86WR0 208 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 UBA3Q8TBC4 463 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 SEC16BQ96JE7 1060 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 PLCD4Q9BRC7 762 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 AGO3Q9H9G7 860 aaKnown RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 FAM49BQ9NUQ9 324 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 SRRDQ9UH36 339 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ATXN2Q99700 1313 aaKnown RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 ANKRD33BA6NCL7 494 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 GOLGA8SH3BPF8 625 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 O00370 1275 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ADAMTS4O75173 837 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 PDGFRBP09619 1106 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ECHS1P30084 290 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 NSFP46459 744 aaKnown RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 GPC5P78333 572 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ZNF564Q8TBZ8 553 aaPredicted RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 ACSF2Q96CM8 615 aaPredicted RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 ZNF570Q96NI8 536 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 KATNAL1Q9BW62 490 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 TRPV6Q9H1D0 765 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ERVK-5Q9HDB9 667 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 GTF2IRD1Q9UHL9 959 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ST3GAL5Q9UNP4 418 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 PCDHB2Q9Y5E7 798 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 DCDC2CA8MYV0 355 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 B4GALT4O60513 344 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 CHRNA1P02708 482 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 INHAP05111 366 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 ANK1P16157 1881 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 CD52P31358 61 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 GJA9P57773 515 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 BYSLQ13895 437 aaKnown RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 FAM182AQ5T1J6 154 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 DCAF12L1Q5VU92 463 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 HASPINQ8TF76 798 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 PRCCQ92733 491 aaPredicted RBP11.24□□□□□ -0.61
TPM3-212ENST00000368533 C18orf8Q96DM3 657 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 NFKBIZQ9BYH8 718 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 INPP5FQ9Y2H2 1132 aa11.24□□□□□ -0.61
TPM3-212ENST00000368533 M0QZ92 97 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 DDX3YO15523 660 aaKnown RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 SLC8A1P32418 973 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RABGGTBP53611 331 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 YARSP54577 528 aaKnown RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 SOX4Q06945 474 aaPredicted RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 USP4Q13107 963 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RBBP5Q15291 538 aaKnown RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 CLEC16AQ2KHT3 1053 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 ZFYVE27Q5T4F4 411 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 TMC3Q7Z5M5 1100 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 CD302Q8IX05 232 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RHOT2Q8IXI1 618 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RASGEF1CQ8N431 466 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 IPPQ9Y573 584 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 A0A1B0GVG6 124 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 GMNCA6NCL1 334 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 PMM2O15305 246 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 COMTP21964 271 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RPS6KA3P51812 740 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 RWDD2BP57060 319 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms