RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ARHGEF19Q8IW93 802 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 EHBP1Q8NDI1 1231 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 KAT5Q92993 513 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 TCEAL4Q96EI5 215 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 ZNF512Q96ME7 567 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 ZNF518BQ9C0D4 1074 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 ELOVL4Q9GZR5 314 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 GRPEL1Q9HAV7 217 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CISHQ9NSE2 258 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 TMEM30AQ9NV96 361 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 FANCLQ9NW38 375 aa16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
SMPDL3A-201ENST00000368440 CACNA2D1P54289 1103 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 EPHB3P54753 998 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 MYL5Q02045 173 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 PLD1Q13393 1074 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 CUL2Q13617 745 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 DDR2Q16832 855 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 ZNF394Q53GI3 561 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 POTEHQ6S545 545 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 C4orf50Q6ZRC1 276 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 UNC93AQ86WB7 457 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 TMC8Q8IU68 726 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 GJD3Q8N144 294 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 ELMOD1Q8N336 334 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 AOPEPQ8N6M6 819 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 C12orf29Q8N999 325 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 ING5Q8WYH8 240 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 FUBP3Q96I24 572 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 LRRC3Q9BY71 257 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 ZNF334Q9HCZ1 680 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 GCNT4Q9P109 453 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 CCDC130P13994 396 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 APBA1Q02410 837 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 MTMR3Q13615 1198 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 MAPRE1Q15691 268 aaKnown RBP16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 PRSS36Q5K4E3 855 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 PAQR9Q6ZVX9 377 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 SCN4BQ8IWT1 228 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 CRYBG2Q8N1P7 616 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 UBR7Q8N806 425 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 TDRD5Q8NAT2 981 aaKnown RBP16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 FAM200AQ8TCP9 573 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 PSMG2Q969U7 264 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 FAXDC2Q96IV6 333 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 TNIP3Q96KP6 325 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 HSD3B7Q9H2F3 369 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 TAB2Q9NYJ8 693 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 NR2E1Q9Y466 385 aa16.05■□□□□ 0.16
SMPDL3A-201ENST00000368440 PATJQ8NI35 1801 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 MOSPD3O75425 235 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 MYL4P12829 197 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 GJA1P17302 382 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 CEBPBP17676 345 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 GBP2P32456 591 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 MAGEA11P43364 429 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 EPHA5P54756 1037 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 CETN1Q12798 172 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 VWA3BQ502W6 1294 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 RRAGAQ7L523 313 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 DNAJB7Q7Z6W7 309 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 PPM1KQ8N3J5 372 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 NT5C1AQ9BXI3 368 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 NDST4Q9H3R1 872 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
SMPDL3A-201ENST00000368440 SLC9A1P19634 815 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 EEF1GP26641 437 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 PHLDB3Q6NSJ2 640 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 FAM35AQ86V20 835 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 FUKQ8N0W3 1084 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 SLC4A11Q8NBS3 891 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 ST13P5Q8NFI4 369 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 ASAH2Q9NR71 780 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 MRPS23Q9Y3D9 190 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 ASB3Q9Y575 518 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 DENND4CQ5VZ89 1909 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 MYH10P35580 1976 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 HMGA1P17096 107 aaKnown RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 GRIK1P39086 918 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 MRE11P49959 708 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 RAD23BP54727 409 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 VEPH1Q14D04 833 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 KRT31Q15323 416 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 GJB7Q6PEY0 223 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 TRIM65Q6PJ69 517 aa16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 PDZD4Q76G19 769 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3A-201ENST00000368440 OTOP3Q7RTS5 596 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms