RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 HOXD13P35453 343 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 FASTKD3Q14CZ7 662 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 PSMD6Q15008 389 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 SPTY2D1Q68D10 685 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 C16orf87Q6PH81 154 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 LPCAT2Q7L5N7 544 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 PRPF39Q86UA1 669 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 MZB1Q8WU39 189 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 TMIGD2Q96BF3 282 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 PPARGC1AQ9UBK2 798 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 A0A1B0GTW7 788 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 PDE8AO60658 829 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 BAIAP3O94812 1187 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 FAM58BPP0C7Q3 252 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 POLR2MP0CAP2 368 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 IL2RBP14784 551 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 ADSSP30520 456 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 TCF7P36402 384 aaPredicted RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 TRPC1P48995 793 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 CASP4P49662 377 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 CCT8P50990 548 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 CD300CQ08708 224 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 PGM2L1Q6PCE3 622 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 CENPUQ71F23 418 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 SLC20A1Q8WUM9 679 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 SREK1Q8WXA9 508 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 BORCS5Q969J3 196 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 MRRFQ96E11 262 aaKnown RBP13.74□□□□□ -0.21
NCSTN-202ENST00000368063 BTBD6Q96KE9 485 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 NSMCE3Q96MG7 304 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 AGPAT1Q99943 283 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 PPCSQ9HAB8 311 aa13.74□□□□□ -0.21
NCSTN-202ENST00000368063 SNAP23O00161 211 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 PIK3CDO00329 1044 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 NLRP10Q86W26 655 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 CHPT1Q8WUD6 406 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 SGF29Q96ES7 293 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 OSBPL10Q9BXB5 764 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 FHDC1Q9C0D6 1143 aaPredicted RBP13.73□□□□□ -0.21
NCSTN-202ENST00000368063 IL17RBQ9NRM6 502 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 LRP2BPQ9P2M1 347 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 ARHGAP42A6NI28 874 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
NCSTN-202ENST00000368063 EDIL3O43854 480 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 CNOT3O75175 753 aaKnown RBP13.73□□□□□ -0.21
NCSTN-202ENST00000368063 BGNP21810 368 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 CIITAP33076 1130 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 PHBP35232 272 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 TBCCQ15814 346 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 EFHC2Q5JST6 749 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 RWDD4Q6NW29 188 aaKnown RBP13.73□□□□□ -0.21
NCSTN-202ENST00000368063 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
NCSTN-202ENST00000368063 EME1Q96AY2 570 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
NCSTN-202ENST00000368063 BMP2KQ9NSY1 1161 aaPredicted RBP13.73□□□□□ -0.21
NCSTN-202ENST00000368063 PRR5-ARHGAP8B1AHC4 643 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 EML1O00423 815 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 ETV4P43268 484 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SLC5A3P53794 718 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 CTSWP56202 376 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 ARHGAP8P85298 464 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SLC25A3Q00325 362 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 CNGA3Q16281 694 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 ACTRT2Q8TDY3 377 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SLC2A11Q9BYW1 496 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SMYD3Q9H7B4 428 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 ZNF335Q9H4Z2 1342 aaPredicted RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 FAM47E-STBD1D6RA91 191 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SERPINB6P35237 376 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 NAPAP54920 295 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 PDIA2Q13087 525 aaKnown RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 RABGAP1LQ5R372 815 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 CCDC89Q8N998 374 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 PNMA1Q8ND90 353 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SLC5A5Q92911 643 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 MXD3Q9BW11 206 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 SYNPO2Q9UMS6 1093 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 TTLL3Q9Y4R7 772 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 USP17L21D6R901 530 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 F5H6K3 240 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 TDP2O95551 362 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 PABPC1P11940 636 aaKnown RBP13.72□□□□□ -0.21
NCSTN-202ENST00000368063 KLRC2P26717 231 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 GNA11P29992 359 aa13.72□□□□□ -0.21
NCSTN-202ENST00000368063 KNOP1Q1ED39 458 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms