RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PNKPQ96T60 521 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 CCDC3Q9BQI4 270 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 RNF112Q9ULX5 631 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 PRAMEF18Q5VWM3 479 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 LRIG3Q6UXM1 1119 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 ZNF669Q96BR6 464 aaPredicted RBP16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 THAP11Q96EK4 314 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 LNPEPQ9UIQ6 1025 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 PCDHB12Q9Y5F1 795 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 GYS2P54840 703 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 ANKRD49Q8WVL7 239 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 MRPL48Q96GC5 212 aaKnown RBP16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 SYBUQ9NX95 663 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 E2F8A0AVK6 867 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 AP1G2O75843 785 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 CKMP06732 381 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 CKBP12277 381 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 PBLDP30039 288 aaPredicted RBP16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 PLD1Q13393 1074 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 CLEC16AQ2KHT3 1053 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 SHC4Q6S5L8 630 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 SIRT2Q8IXJ6 389 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 MYO1HQ8N1T3 1032 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 AGBL3Q8NEM8 1001 aa16.32■□□□□ 0.2
NUCKS1-201ENST00000367142 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 UCHL3P15374 230 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 DEFA1P59665 94 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 DEFA3P59666 94 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 ZNF544Q6NX49 715 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 ITIH5Q86UX2 942 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 UTP6Q9NYH9 597 aaKnown RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 FBXO2Q9UK22 296 aaPredicted RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 PNMA8BQ9ULN7 279 aaPredicted RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 M0QYT0 321 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 EIF2S1P05198 315 aaKnown RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 RRM2P31350 389 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 FRMD8Q9BZ67 464 aaPredicted RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 WDR41Q9HAD4 459 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 GARTP22102 1010 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 BRD2P25440 801 aaKnown RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 LONRF1Q17RB8 773 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 EDRF1Q3B7T1 1238 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 CTXN3Q4LDR2 81 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 ALFQ53S48 1182 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 FEZF2Q8TBJ5 459 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 ECSITQ9BQ95 431 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 YIPF3Q9GZM5 350 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 MAP10Q9P2G4 905 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 GTF2A1LQ9UNN4 478 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 AAR2Q9Y312 384 aaKnown RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 AIM2O14862 343 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 AVPR1AP37288 418 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 WLSQ5T9L3 541 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 AGAP9Q5VTM2 703 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 FGD2Q7Z6J4 655 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 CDR2LQ86X02 465 aaPredicted RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 ZNF614Q8N883 585 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 SGSM3Q96HU1 749 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 DDIT4Q9NX09 232 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 MARCOQ9UEW3 520 aaPredicted RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 MTO1Q9Y2Z2 717 aaKnown RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 ITGALP20701 1170 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 CYP4Z1Q86W10 505 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 PPIL6Q8IXY8 311 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 TRIM51Q9BSJ1 452 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 FAM167BQ9BTA0 163 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 OSBPL8Q9BZF1 889 aa16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 THG1LQ9NWX6 298 aaKnown RBP16.31■□□□□ 0.2
NUCKS1-201ENST00000367142 GTF2E2P29084 291 aaKnown RBP16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 STARD3Q14849 445 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 ATG4CQ96DT6 458 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 DPEP1P16444 411 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 RPS7P62081 194 aaKnown RBP16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 FAM9CQ8IZT9 166 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 SKA1Q96BD8 255 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 RPRD1BQ9NQG5 326 aaKnown RBP16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 SSU72P8A0A1W2PR75 194 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 CST8O60676 142 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 SOX11P35716 441 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 CEP78Q5JTW2 689 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 LONP2Q86WA8 852 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 C4orf33Q8N1A6 199 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 SLC20A1Q8WUM9 679 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 IL1RL2Q9HB29 575 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 TUBGCP4Q9UGJ1 667 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
NUCKS1-201ENST00000367142 ATXN3P54252 364 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms