RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SRRM1Q8IYB3 904 aaKnown RBP15.49■□□□□ 0.07
PRKN-204ENST00000366896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.49■□□□□ 0.071e-7■■■■■ 323.4
PRKN-204ENST00000366896 ASAP3Q8TDY4 903 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 SH3TC2Q8TF17 1288 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 ETAA1Q9NY74 926 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 HAO1Q9UJM8 370 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 USH1CQ9Y6N9 552 aa15.49■□□□□ 0.07
PRKN-204ENST00000366896 LRRD1A4D1F6 860 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 NDC80O14777 642 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 C4BPAP04003 597 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 CD58P19256 250 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 ACO1P21399 889 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 TARSP26639 723 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 KLRC2P26717 231 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 CCND2P30279 289 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 PCK1P35558 622 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 WDR4P57081 412 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 WASHC2DQ5SRD0 308 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 TMEM63BQ5T3F8 832 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 ZCCHC9Q8N567 271 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 RNF217Q8TC41 542 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 C9orf72Q96LT7 481 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 NUDCD1Q96RS6 583 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 TSC22D3Q99576 134 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 OSBPL8Q9BZF1 889 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 PPCSQ9HAB8 311 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 KLHL11Q9NVR0 708 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 IVNS1ABPQ9Y6Y0 642 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 UPP2O95045 317 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 HLA-DRAP01903 254 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 ACADSP16219 412 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 ADORA2AP29274 412 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 RNASELQ05823 741 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 GRB14Q14449 540 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 RASA2Q15283 850 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 TDRD10Q5VZ19 366 aaKnown RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 NLRX1Q86UT6 975 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 SLC7A6OSQ96CW6 309 aaPredicted RBP15.48■□□□□ 0.07
PRKN-204ENST00000366896 LRRC37BQ96QE4 947 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 ARID2Q68CP9 1835 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 ZNF236Q9UL36 1845 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 PLXNA1Q9UIW2 1896 aa15.48■□□□□ 0.07
PRKN-204ENST00000366896 LRRC37A2A6NM11 1700 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 PIGRP01833 764 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 CETN2P41208 172 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 PAPOLAP51003 745 aaKnown RBP15.47■□□□□ 0.07
PRKN-204ENST00000366896 NOMO3P69849 1222 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 IZUMO3Q5VZ72 239 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 TTC25Q96NG3 672 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 TBC1D10AQ9BXI6 508 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 RPL26L1Q9UNX3 145 aaKnown RBP15.47■□□□□ 0.07
PRKN-204ENST00000366896 USTQ9Y2C2 406 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 FAM47DPA6NHR8 397 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 ASMTLO95671 621 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 T-ENOLP0DO92 83 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 EDNRBP24530 442 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 PIK3CAP42336 1068 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 ACOT2P49753 483 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 TUBP50607 506 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 RAB27AP51159 221 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 NLRP11P59045 1033 aaKnown RBP15.47■□□□□ 0.07
PRKN-204ENST00000366896 MAMLD1Q13495 774 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 CCDC142Q17RM4 750 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 ZNF792Q3KQV3 632 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 LRRC38Q5VT99 294 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 SWSAP1Q6NVH7 229 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 RGS9BPQ6ZS82 235 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 LONP2Q86WA8 852 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 MFN1Q8IWA4 741 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 MAML1Q92585 1016 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 SYT15Q9BQS2 421 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 APOBEC3GQ9HC16 384 aaKnown RBP15.47■□□□□ 0.07
PRKN-204ENST00000366896 PAPOLBQ9NRJ5 636 aaKnown RBP15.47■□□□□ 0.07
PRKN-204ENST00000366896 SEPT9Q9UHD8 586 aaPredicted RBP15.47■□□□□ 0.07
PRKN-204ENST00000366896 ASB3Q9Y575 518 aa15.47■□□□□ 0.07
PRKN-204ENST00000366896 DCTN3O75935 186 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 VNN1O95497 513 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 PTDSS1P48651 473 aaKnown RBP15.46■□□□□ 0.07
PRKN-204ENST00000366896 MXRA7P84157 204 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 MCL1Q07820 350 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 CWF19L1Q69YN2 538 aaKnown RBP15.46■□□□□ 0.07
PRKN-204ENST00000366896 SCARA3Q6AZY7 606 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 CFAP57Q96MR6 1250 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 CFHR5Q9BXR6 569 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.07
PRKN-204ENST00000366896 PHTF1Q9UMS5 762 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 WDR81Q562E7 1941 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 DOCK3Q8IZD9 2030 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 DOCK5Q9H7D0 1870 aa15.46■□□□□ 0.07
PRKN-204ENST00000366896 SLC15A5A6NIM6 579 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 TRAFD1O14545 582 aaPredicted RBP15.46■□□□□ 0.06
PRKN-204ENST00000366896 SMIM24O75264 130 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 AP1G2O75843 785 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 PSAPP07602 524 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 PDHA1P08559 390 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 GNAT1P11488 350 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 TCF4P15884 667 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 TNNI1P19237 187 aa15.46■□□□□ 0.06
PRKN-204ENST00000366896 TBXAS1P24557 533 aaPredicted RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms