RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 KCNA2P16389 499 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 HMOX2P30519 316 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 GNL1P36915 607 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 MARCH10Q8NA82 808 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 TMX2Q9Y320 296 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 HIST1H2AGP0C0S8 130 aaPredicted RBP12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 HIST1H2ADP20671 130 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 ATXN2LQ8WWM7 1075 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 HIST1H2AHQ96KK5 128 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 HIST1H2AJQ99878 128 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 FAM167BQ9BTA0 163 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 H2AFJQ9BTM1 129 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 RBBP7Q16576 425 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 CYBBP04839 570 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 GHRP10912 638 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 MAP4P27816 1152 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 TAF6P49848 677 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 DNAJC6O75061 913 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 VDRP11473 427 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PSMA4P25789 261 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PCYT1AP49585 367 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 NEK2P51955 445 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 KRR1Q13601 381 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PTK2BQ14289 1009 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 TXNRD3Q86VQ6 643 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PCMTD2Q9NV79 361 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 HOXB8P17481 243 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 WLSQ5T9L3 541 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 CARNS1A5YM72 827 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ODC1P11926 461 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 EPS8L2Q9H6S3 715 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ARHGEF9O43307 516 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 KDM1AO60341 852 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PROSCO94903 275 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ARPP19P56211 112 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 YTHDF3Q7Z739 585 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PRPF39Q86UA1 669 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 C1orf131Q8NDD1 294 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PCDHGC5Q9Y5F6 944 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 KCNA3P22001 575 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 SH3GL1Q99961 368 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 TASP1Q9H6P5 420 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 APPL1Q9UKG1 709 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 DYTNA2CJ06 578 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 CYP24A1Q07973 514 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ACTN3Q08043 901 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 USP10Q14694 798 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 POP5Q969H6 163 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLITRK1Q96PX8 696 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 MAF1Q9H063 256 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 BAZ2AQ9UIF9 1905 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ATXN2Q99700 1313 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 GRIK1P39086 918 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 ATP8B4Q8TF62 1192 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 SIK2Q9H0K1 926 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 CCDC15Q0P6D6 951 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 UNC45BQ8IWX7 931 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PGM2Q96G03 612 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 FAM32AQ9Y421 112 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-203ENST00000366766 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 STRNO43815 780 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 PDCD6IPQ8WUM4 868 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ITGA11Q9UKX5 1188 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 PXDNQ92626 1479 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 NALCNQ8IZF0 1738 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 RGPD8O14715 1765 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 HNRNPCL2B2RXH8 293 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 MRIQ9BWK5 157 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CETPP11597 493 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CAP2P40123 477 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ITPK1Q13572 414 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CYLC2Q14093 348 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 FLOT2Q14254 428 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ABTB1Q969K4 478 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CENPTQ96BT3 561 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 C20orf96Q9NUD7 363 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 CYB5D1Q6P9G0 228 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms