RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 UNC45BQ8IWX7 931 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 SYTL1Q8IYJ3 562 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 LCORLQ8N3X6 602 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 PIGSQ96S52 555 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CHP1Q99653 195 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 APOL4Q9BPW4 351 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CARNS1A5YM72 827 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TNFRSF21O75509 655 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ASMTLO95671 621 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 A1BGP04217 495 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TMEM132BQ14DG7 1078 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CACHD1Q5VU97 1274 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CAMK1DQ8IU85 385 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CYP4Z2PQ8N1L4 340 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 SHCBP1Q8NEM2 672 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ISCUQ9H1K1 167 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TRIM10Q9UDY6 481 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 PNMA8CA0A1B0GUJ8 204 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 UQCRBP14927 111 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ATP7AQ04656 1500 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 RTN2O75298 545 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CD4P01730 458 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ITGADQ13349 1161 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 KCNB1Q14721 858 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 FUT11Q495W5 492 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 B3GNT6Q6ZMB0 384 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TRPC5OSA6NMA1 111 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TM9SF1O15321 606 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 CENPAP49450 140 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 PEG10Q86TG7 708 aaKnown RBP13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 KLHL23Q8NBE8 558 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 RXFP1Q9HBX9 757 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 GRID1Q9ULK0 1009 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ANKARQ7Z5J8 1434 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 SERPIND1P05546 499 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 VAMP7P51809 220 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 COASYQ13057 564 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 DHX35Q9H5Z1 703 aaKnown RBP13.7□□□□□ -0.22
SRGAP3-201ENST00000360413 ASB14A6NK59 587 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 GRIK1P39086 918 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 NME3Q13232 169 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 RGS21Q2M5E4 152 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 KRT74Q7RTS7 529 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 GLYCTKQ8IVS8 523 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 TMEM237Q96Q45 408 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 COA1Q9GZY4 146 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 KCND2Q9NZV8 630 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 TGFBR2P37173 567 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 RDM1Q8NG50 284 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SKA1Q96BD8 255 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 ZNF341Q9BYN7 854 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 UBE2OQ9C0C9 1292 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC30A1Q9Y6M5 507 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 CDHR2Q9BYE9 1310 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 KBTBD13C9JR72 458 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 FKBP6O75344 327 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 PCSK1P29120 753 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 ZNF57Q68EA5 555 aaPredicted RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 RCOR2Q8IZ40 523 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SPON2Q9BUD6 331 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 C1orf50Q9BV19 199 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 ARHGEF38Q9NXL2 777 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 UTYO14607 1347 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 RAD51BO15315 384 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 GTF2E2P29084 291 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 OVGP1Q12889 678 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 UBE2SQ16763 222 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 ANKRD40Q6AI12 368 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 P4HA2O15460 535 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SNRPAP09012 282 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 USP10Q14694 798 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 KNOP1Q1ED39 458 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 FAM102AQ5T9C2 384 aaPredicted RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 CDK5RAP1Q96SZ6 601 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 CNTRLQ7Z7A1 2325 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 GSTT1P30711 240 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 MAGEA4P43358 317 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 LGALS3BPQ08380 585 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 FCHO2Q0JRZ9 810 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms