RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 ACSS3Q9H6R3 686 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 PCDH9Q9HC56 1237 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 IP6K2Q9UHH9 426 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 NUB1Q9Y5A7 615 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 SCINQ9Y6U3 715 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 SLX4Q8IY92 1834 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 BGNP21810 368 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 MMP8P22894 467 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 ETV4P43268 484 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 ARL4CP56559 192 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 CLDN10P78369 228 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 CDK16Q00536 496 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 HSF5Q4G112 596 aaPredicted RBP11.43□□□□□ -0.58
RPE-202ENST00000359429 USP37Q86T82 979 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 ALYREFQ86V81 257 aaKnown RBP11.43□□□□□ -0.58
RPE-202ENST00000359429 ZC3H18Q86VM9 953 aaKnown RBP11.43□□□□□ -0.58
RPE-202ENST00000359429 SAMD3Q8N6K7 520 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 NAT8LQ8N9F0 302 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 SYTL5Q8TDW5 730 aaPredicted RBP11.43□□□□□ -0.58
RPE-202ENST00000359429 GJD4Q96KN9 370 aaPredicted RBP11.43□□□□□ -0.58
RPE-202ENST00000359429 FAM111AQ96PZ2 611 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.43□□□□□ -0.58
RPE-202ENST00000359429 SCN9AQ15858 1988 aa11.43□□□□□ -0.58
RPE-202ENST00000359429 FAM237BA0A1B0GVD1 139 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 TCRBV5S1A1TA0A578 114 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ATP2A1O14983 1001 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 HNRNPCL1O60812 293 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 ICAM1P05362 532 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 DHRS4L1P0CG22 281 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 CAP2P40123 477 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 PTGER2P43116 358 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 NEK3P51956 506 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 DGKZQ13574 1117 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 THOC5Q13769 683 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 PRKD1Q15139 912 aaPredicted RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 SMTNL2Q2TAL5 461 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 TFDP3Q5H9I0 405 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 NIPA1Q7RTP0 329 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 CCNJLQ8IV13 435 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 VPS52Q8N1B4 723 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ACTL9Q8TC94 416 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ZNF606Q8WXB4 792 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 TTC17Q96AE7 1141 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 MCUR1Q96AQ8 359 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ZBTB45Q96K62 511 aaPredicted RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 CEP170P1Q96L14 293 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 DDX50Q9BQ39 737 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 PPP1R12CQ9BZL4 782 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 NMUR2Q9GZQ4 415 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 XPNPEP1Q9NQW7 623 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ANKEF1Q9NU02 776 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 TBC1D22BQ9NU19 505 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 WDR35Q9P2L0 1181 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 TRPC5Q9UL62 973 aaPredicted RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 ANKRD33BA6NCL7 494 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 C3orf70A6NLC5 250 aaPredicted RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 TM9SF1O15321 606 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 DNAJC6O75061 913 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 RARBP10826 455 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 MYL2P10916 166 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 GARTP22102 1010 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 RPL22P35268 128 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 OTUD4Q01804 1114 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 ZBTB16Q05516 673 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 MCL1Q07820 350 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 NBPF20Q3BBV1 942 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 BBS9Q3SYG4 887 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ZC3H12AQ5D1E8 599 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 KCNT1Q5JUK3 1230 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 SYCP2LQ5T4T6 812 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 CDHR3Q6ZTQ4 885 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 SH2D5Q6ZV89 423 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 GALNT15Q8N3T1 639 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 ATP11CQ8NB49 1132 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 GATA6Q92908 595 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 FNBP1Q96RU3 617 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 SYNCQ9H7C4 482 aa11.42□□□□□ -0.58
RPE-202ENST00000359429 STX18Q9P2W9 335 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 HERC5Q9UII4 1024 aaKnown RBP11.42□□□□□ -0.58
RPE-202ENST00000359429 WDR64B1ANS9 1081 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 FCHO1O14526 889 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 EXTL3O43909 919 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 LPXNO60711 386 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 STBD1O95210 358 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 ESRRAP11474 423 aaPredicted RBP11.41□□□□□ -0.58
RPE-202ENST00000359429 ROR2Q01974 943 aaKnown RBP11.41□□□□□ -0.58
RPE-202ENST00000359429 PSMD6Q15008 389 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 PGM5Q15124 567 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 SEZ6Q53EL9 994 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 TRIM72Q6ZMU5 477 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 FAM160B2Q86V87 743 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 TREML1Q86YW5 311 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 OR5B17Q8NGF7 314 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 ZNF395Q9H8N7 513 aaPredicted RBP11.41□□□□□ -0.58
RPE-202ENST00000359429 PPCSQ9HAB8 311 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 GINM1Q9NU53 330 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 CHMP2BQ9UQN3 213 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 UBR3Q6ZT12 1888 aa11.41□□□□□ -0.58
RPE-202ENST00000359429 TESPA1A2RU30 521 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms