RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 PCSK1NQ9UHG2 260 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 AGAP1Q9UPQ3 857 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.67■□□□□ 0.26
PHTF1-201ENST00000357783 PLXNB2O15031 1838 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 GOLGA6L7A0A1B0GV03 622 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 EPHX2P34913 555 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 TMEM132DQ14C87 1099 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 NKD2Q969F2 451 aaPredicted RBP16.67■□□□□ 0.26
PHTF1-201ENST00000357783 TPX2Q9ULW0 747 aaKnown RBP16.67■□□□□ 0.26
PHTF1-201ENST00000357783 DRG1Q9Y295 367 aaKnown RBP16.67■□□□□ 0.26
PHTF1-201ENST00000357783 CITO14578 2027 aa16.67■□□□□ 0.26
PHTF1-201ENST00000357783 H0YHG0 523 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 MAGEB2O15479 319 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 TCEA3O75764 348 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 FSBPO95073 299 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
PHTF1-201ENST00000357783 HADHQ16836 314 aaKnown RBP16.66■□□□□ 0.26
PHTF1-201ENST00000357783 SPRED3Q2MJR0 410 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 FBXW10Q5XX13 1052 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 MAMDC4Q6UXC1 1216 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 CAPN12Q6ZSI9 719 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 RELL1Q8IUW5 271 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 LINC01465Q8N7H1 131 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 GPRC5AQ8NFJ5 357 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 UBA3Q8TBC4 463 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 HEXIM2Q96MH2 286 aaKnown RBP16.66■□□□□ 0.26
PHTF1-201ENST00000357783 OSBPL7Q9BZF2 842 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 CCDC134Q9H6E4 229 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 LOC102724159A0A0B4J2E5 919 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 PIK3R2O00459 728 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 CST8O60676 142 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 ITGAVP06756 1048 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 KRT7P08729 469 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 CD48P09326 243 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 OTUD4Q01804 1114 aaKnown RBP16.66■□□□□ 0.26
PHTF1-201ENST00000357783 ADCY1Q08828 1119 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 PWP2Q15269 919 aaKnown RBP16.66■□□□□ 0.26
PHTF1-201ENST00000357783 ZNF792Q3KQV3 632 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 CCDC197Q8NCU1 140 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 PPTC7Q8NI37 304 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 ACTL9Q8TC94 416 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 CCDC77Q9BR77 488 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.66■□□□□ 0.26
PHTF1-201ENST00000357783 KAT6AQ92794 2004 aa16.66■□□□□ 0.26
PHTF1-201ENST00000357783 TRIP11Q15643 1979 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 ATP2C2O75185 946 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 CDH16O75309 829 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 BRAFP15056 766 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 MKRN3Q13064 507 aaKnown RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 STAT4Q14765 748 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 SRRM1Q8IYB3 904 aaKnown RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 SLC35B2Q8TB61 432 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 FNIP1Q8TF40 1166 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 FOXP3Q9BZS1 431 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 ASB7Q9H672 318 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 GOLGA8MH3BSY2 632 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 P4HA1P13674 534 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 TMED2Q15363 201 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 TAF5Q15542 800 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 FAM102AQ5T9C2 384 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 MTHFD1LQ6UB35 978 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 HSPH1Q92598 858 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 SLC10A4Q96EP9 437 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 ELAC2Q9BQ52 826 aaKnown RBP16.65■□□□□ 0.26
PHTF1-201ENST00000357783 PCDH9Q9HC56 1237 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 WDR35Q9P2L0 1181 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 LGALS13Q9UHV8 139 aa16.65■□□□□ 0.26
PHTF1-201ENST00000357783 KDELR1P24390 212 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 ATICP31939 592 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 NDST1P52848 882 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 ACTN3Q08043 901 aaPredicted RBP16.64■□□□□ 0.25
PHTF1-201ENST00000357783 MPP2Q14168 576 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 ZNF268Q14587 947 aaPredicted RBP16.64■□□□□ 0.25
PHTF1-201ENST00000357783 RNASEH2BQ5TBB1 312 aaKnown RBP16.64■□□□□ 0.25
PHTF1-201ENST00000357783 CEP128Q6ZU80 1094 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 CCDC13Q8IYE1 715 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 TAB3Q8N5C8 712 aaPredicted RBP16.64■□□□□ 0.25
PHTF1-201ENST00000357783 KCTD6Q8NC69 237 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 GDAP1Q8TB36 358 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 CFAP57Q96MR6 1250 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 C16orf70Q9BSU1 422 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 VTA1Q9NP79 307 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.64■□□□□ 0.25
PHTF1-201ENST00000357783 SAMD15Q9P1V8 674 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 EXOC1LA0A1B0GW35 172 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 TSPAN1O60635 241 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 YBX3P16989 372 aaKnown RBP eCLIP16.64■□□□□ 0.25
PHTF1-201ENST00000357783 MIPP30301 263 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 GDF10P55107 478 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 CCNA1P78396 465 aa16.64■□□□□ 0.25
PHTF1-201ENST00000357783 MYO1EQ12965 1108 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms