RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 RAB23Q9ULC3 237 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 USP18Q9UMW8 372 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 MAGED2Q9UNF1 606 aaPredicted RBP10.98□□□□□ -0.65
LINC01560-201ENST00000357412 PTPRJQ12913 1337 aa10.98□□□□□ -0.65
LINC01560-201ENST00000357412 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 TRDMT1O14717 391 aaKnown RBP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 KIAA0391O15091 583 aaKnown RBP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 STX6O43752 255 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 TMEM191BP0C7N4 346 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 ARSAP15289 507 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 SDHBP21912 280 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 LMO2P25791 158 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 LHX1P48742 406 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 SPEM2Q0P670 501 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 HEATR6Q6AI08 1181 aaKnown RBP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 FSTL4Q6MZW2 842 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 ADGRF2Q8IZF7 708 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 NOC3LQ8WTT2 800 aaKnown RBP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 KBTBD7Q8WVZ9 684 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 TRMT2BQ96GJ1 504 aaKnown RBP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 FUBP3Q96I24 572 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 TRIM9Q9C026 710 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 TNMDQ9H2S6 317 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 KIF9Q9HAQ2 790 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 FBRSL1Q9HCM7 1045 aaKnown RBP10.97□□□□□ -0.65
LINC01560-201ENST00000357412 INTS13Q9NVM9 706 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 FRYLO94915 3013 aa10.97□□□□□ -0.65
LINC01560-201ENST00000357412 SPTBN2O15020 2390 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 ZNF233A6NK53 670 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 SPTLC2O15270 562 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 ATP2C2O75185 946 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 PCSK1P29120 753 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 GRSF1Q12849 480 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 STK38Q15208 465 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 DUOXA2Q1HG44 320 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 NAIF1Q69YI7 327 aaPredicted RBP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 EPM2AIP1Q7L775 607 aaPredicted RBP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 DPH6Q7L8W6 267 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 WDR5BQ86VZ2 330 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 SPATA2LQ8IUW3 424 aaPredicted RBP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 HPDLQ96IR7 371 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 ANKRD36BP1Q96IX9 119 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 SLC22A12Q96S37 553 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 CYP2S1Q96SQ9 504 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 CRTAC1Q9NQ79 661 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 SEMA4GQ9NTN9 838 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 HSPBP1Q9NZL4 362 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 GCNT4Q9P109 453 aa10.96□□□□□ -0.65
LINC01560-201ENST00000357412 UXTQ9UBK9 157 aaPredicted RBP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 CDV3Q9UKY7 258 aaKnown RBP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.65
LINC01560-201ENST00000357412 MTCL1Q9Y4B5 1905 aaKnown RBP10.96□□□□□ -0.66
LINC01560-201ENST00000357412 DCDC2BA2VCK2 349 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 K7ELQ4 463 aaPredicted RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 TGFB1I1O43294 461 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 LRP3O75074 770 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 PPP6R2O75170 966 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 CST3P01034 146 aaPredicted RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 EGFP01133 1207 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 WARSP23381 471 aaKnown RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 MAGEA11P43364 429 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 PXNP49023 591 aaPredicted RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 GALK1P51570 392 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 MYO1EQ12965 1108 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 MTF1Q14872 753 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 PDGFRLQ15198 375 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 SURF1Q15526 300 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 ZNF77Q15935 545 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 CNNM4Q6P4Q7 775 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 SHC4Q6S5L8 630 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 STXBP4Q6ZWJ1 553 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 TRAPPC11Q7Z392 1133 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 WDR49Q8IV35 697 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 SCN4BQ8IWT1 228 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 ZNF507Q8TCN5 953 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 OSCP1Q8WVF1 389 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 MYLPFQ96A32 169 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 DHX58Q96C10 678 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 SYT15Q9BQS2 421 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 RTKNQ9BST9 563 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 LRRC27Q9C0I9 530 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 CUEDC2Q9H467 287 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 TRPC7Q9HCX4 862 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 AGPAT3Q9NRZ7 376 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 POLR3BQ9NW08 1133 aaPredicted RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 TFIP11Q9UBB9 837 aaKnown RBP10.95□□□□□ -0.66
LINC01560-201ENST00000357412 CDH9Q9ULB4 789 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 NME7Q9Y5B8 376 aa10.95□□□□□ -0.66
LINC01560-201ENST00000357412 TRAV19A0A0A6YYK7 116 aa10.94□□□□□ -0.66
LINC01560-201ENST00000357412 CCDC163A0A0D9SF12 145 aa10.94□□□□□ -0.66
LINC01560-201ENST00000357412 C2orf78A6NCI8 922 aa10.94□□□□□ -0.66
LINC01560-201ENST00000357412 EIF3DO15371 548 aaKnown RBP eCLIP10.94□□□□□ -0.66
LINC01560-201ENST00000357412 RNF40O75150 1001 aa10.94□□□□□ -0.66
LINC01560-201ENST00000357412 TNNC2P02585 160 aa10.94□□□□□ -0.66
LINC01560-201ENST00000357412 PDGFRBP09619 1106 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms