RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PDXKO00764 312 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 ALOX15P16050 662 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 CACNA2D1P54289 1103 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 DKK3Q9UBP4 350 aa11.95□□□□□ -0.5
SPTBN1-202ENST00000356805 TRPC5OSA6NMA1 111 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 NFICP08651 508 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 CHRM3P20309 590 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PBLDP30039 288 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 ALDH1A3P47895 512 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 KCNK10P57789 538 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 GRAPQ13588 217 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 SLC7A14Q8TBB6 771 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 GRAPLQ8TC17 118 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 KYAT1Q16773 422 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 GALNTL6Q49A17 601 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 C11orf88Q6PI97 169 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 BNIPLQ7Z465 357 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 NOA1Q8NC60 698 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 EXD1Q8NHP7 514 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 MASTLQ96GX5 879 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 HPGDP15428 266 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 ITGAXP20702 1163 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PSMC6P62333 389 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 ALX1Q15699 326 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PNKPQ96T60 521 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PRDM15P57071 1507 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 NEDD4P46934 1319 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 ANKS1AQ92625 1134 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 RPS6KB2Q9UBS0 482 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 MYO3BQ8WXR4 1341 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 TEX28O15482 410 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 NUMBP49757 651 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 YWHAZP63104 245 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 POU4F1Q01851 419 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 EDRF1Q3B7T1 1238 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PAPD7Q5XG87 772 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM65Q6PJ69 517 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 NRDE2Q9H7Z3 1164 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 TUBGCP4Q9UGJ1 667 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 NEU2Q9Y3R4 380 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 ZNF335Q9H4Z2 1342 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 CSNK2BP67870 215 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 MTF1Q14872 753 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 PGS1Q32NB8 556 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 TMBIM4Q9HC24 238 aa11.94□□□□□ -0.5
SPTBN1-202ENST00000356805 ATP6V1B1P15313 513 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 HARS2P49590 506 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 TTC39BQ5VTQ0 682 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 METTL16Q86W50 562 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 MED15Q96RN5 788 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SLC39A10Q9ULF5 831 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SAMD9LQ8IVG5 1584 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 TRIM24O15164 1050 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 RAD51CO43502 376 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 MMP10P09238 476 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 CNTN1Q12860 1018 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SNX17Q15036 470 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 NFIL3Q16649 462 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 HIST2H2ACQ16777 129 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 HIST2H2AA3Q6FI13 130 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM25AB3EWG3 89 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM25CB3EWG5 89 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM25GB3EWG6 89 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 BARGINQ6ZT62 677 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 GLMNQ92990 594 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 WDR35Q9P2L0 1181 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM58BPP0C7Q3 252 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ZNF438Q7Z4V0 828 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 VPS37AQ8NEZ2 397 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ATXN2LQ8WWM7 1075 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 KCND1Q9NSA2 647 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 NCF1BA6NI72 391 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 NCF1CA8MVU1 366 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 STX7O15400 261 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 THRAP10827 490 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 CYP19A1P11511 503 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 NCF1P14598 390 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 PECAM1P16284 738 aaPredicted RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 PTPN7P35236 360 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SMTNL2Q2TAL5 461 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 HEATR4Q86WZ0 1026 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 RNASE11Q8TAA1 199 aaKnown RBP11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM81AQ8TBF8 368 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ARHGEF26Q96DR7 871 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 RBBP8Q99708 897 aa11.93□□□□□ -0.5
SPTBN1-202ENST00000356805 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms