RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TRABDQ9H4I3 376 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 PTPRHQ9HD43 1115 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 CHMP2BQ9UQN3 213 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 KLHL20Q9Y2M5 609 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 PCDHA10Q9Y5I2 948 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 NPTXRO95502 500 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 ANXA11P50995 505 aaKnown RBP17.91■□□□□ 0.46
COL27A1-201ENST00000356083 TTC23Q5W5X9 447 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 FAM45BPQ6NSW5 357 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 HPS3Q969F9 1004 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 CYP4F12Q9HCS2 524 aa17.91■□□□□ 0.46
COL27A1-201ENST00000356083 SV2CQ496J9 727 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 C16orf89Q6UX73 402 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 C4orf33Q8N1A6 199 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF518AQ6AHZ1 1483 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 LOC100653049A0A140TA62 436 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 KRT34O76011 436 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 SKIV2L2P42285 1042 aaKnown RBP17.9■□□□□ 0.46
COL27A1-201ENST00000356083 KIF23Q02241 960 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-201ENST00000356083 DGKDQ16760 1214 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 LONP2Q86WA8 852 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 UNC5CLQ8IV45 518 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 ZNF512BQ96KM6 892 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-201ENST00000356083 WWP1Q9H0M0 922 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 ALKBH4Q9NXW9 302 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 SNTNA6NMZ2 147 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 CIAO1O76071 339 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 RHAGQ02094 409 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 SGCGQ13326 291 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 KYAT1Q16773 422 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 CD4P01730 458 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 FAM200BP0CF97 657 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 CCDC130P13994 396 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 CTSEP14091 401 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 LAMB3Q13751 1172 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 SETD3Q86TU7 594 aaPredicted RBP17.9■□□□□ 0.46
COL27A1-201ENST00000356083 MRPL48Q96GC5 212 aaKnown RBP17.9■□□□□ 0.46
COL27A1-201ENST00000356083 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 FOXP3Q9BZS1 431 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 AKR1B1P15121 316 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 SLC11A2P49281 568 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 TBC1D23Q9NUY8 699 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 MYO3BQ8WXR4 1341 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 OR6A2O95222 327 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 ARHGEF26Q96DR7 871 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 MIR1-1HGQ9H1L0 117 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 RHBGQ9H310 441 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 DYRK1BQ9Y463 629 aa17.9■□□□□ 0.46
COL27A1-201ENST00000356083 STX7O15400 261 aaKnown RBP17.89■□□□□ 0.46
COL27A1-201ENST00000356083 CAAP1Q9H8G2 361 aa17.89■□□□□ 0.46
COL27A1-201ENST00000356083 AP3B1O00203 1094 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 POLBP06746 335 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 CYP24A1Q07973 514 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 ZNF284Q2VY69 593 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 ACSF2Q96CM8 615 aaPredicted RBP17.89■□□□□ 0.45
COL27A1-201ENST00000356083 RBMXL2O75526 392 aaKnown RBP17.89■□□□□ 0.45
COL27A1-201ENST00000356083 PRKAA1Q13131 559 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 TAF1DQ9H5J8 278 aaPredicted RBP17.89■□□□□ 0.45
COL27A1-201ENST00000356083 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 PRKAG3Q9UGI9 489 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 MYBL1P10243 752 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 SERPINB5P36952 375 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 CCDC185Q8N715 623 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 TMEM47Q9BQJ4 181 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 RGS18Q9NS28 235 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 PP2D1A8MPX8 630 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 CPT1AP50416 773 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 MMRN1Q13201 1228 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 PI4K2AQ9BTU6 479 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 UTYO14607 1347 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 TCEAL5Q5H9L2 206 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 KLHL17Q6TDP4 642 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 FBXO32Q969P5 355 aa17.89■□□□□ 0.45
COL27A1-201ENST00000356083 RPRD1AQ96P16 312 aaPredicted RBP17.89■□□□□ 0.45
COL27A1-201ENST00000356083 NMT1P30419 496 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 EDRF1Q3B7T1 1238 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 SLC13A5Q86YT5 568 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 SLC4A9Q96Q91 983 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 CAMKK2Q96RR4 588 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 UVRAGQ9P2Y5 699 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 CCL15-CCL14A0A0B4J2E2 113 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 KIF1CO43896 1103 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 CCL15Q16663 113 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 EMBQ6PCB8 327 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 SERHL2Q9H4I8 314 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 SERHLQ9NQF3 203 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 RUVBL2Q9Y230 463 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 MSH4O15457 936 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 MTRF1O75570 445 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 PCSK1P29120 753 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 HSPA9P38646 679 aaKnown RBP17.88■□□□□ 0.45
COL27A1-201ENST00000356083 HLFQ16534 295 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 NT5C1AQ9BXI3 368 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 PRKD2Q9BZL6 878 aa17.88■□□□□ 0.45
COL27A1-201ENST00000356083 SLC38A7Q9NVC3 462 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms