RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 KLC1Q07866 573 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TTYH3Q9C0H2 523 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 O00370 1275 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 EXTL3O43909 919 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 SDC4P31431 198 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 DGKZQ13574 1117 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 AGAP1Q9UPQ3 857 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 ROBO1Q9Y6N7 1651 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TTC4O95801 387 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 FECHP22830 423 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PRKCIP41743 596 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 KRT35Q92764 455 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 TATDN2Q93075 761 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
COLCA1-201ENST00000355430 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 MX2P20592 715 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CPA2P48052 419 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 STILQ15468 1287 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 METTL7BQ6UX53 244 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 TAS1R2Q8TE23 839 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ALKBH8Q96BT7 664 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CCDC124Q96CT7 223 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SH3GL2Q99962 352 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 BTNL10A8MVZ5 291 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 APOL1O14791 398 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CST8O60676 142 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SLITRK3O94933 977 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ACVR2BQ13705 512 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 MCUQ8NE86 351 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 HDAC11Q96DB2 347 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PGM2Q96G03 612 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 APBA2Q99767 749 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 FGFBP2Q9BYJ0 223 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 NAALADL1Q9UQQ1 740 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ABCC6O95255 1503 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 IRF6O14896 467 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SLC4A1P02730 911 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 FLT3P36888 993 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CRYMQ14894 314 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CRY2Q49AN0 593 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ACCSLQ4AC99 568 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 GPAT2Q6NUI2 795 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PPCSQ9HAB8 311 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 RAB6BQ9NRW1 208 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CHD2O14647 1828 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 LRRC37A3O60309 1634 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ASTN1O14525 1302 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 GOLGA8QA0A0J9YX86 632 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 GOLGA8OA6NCC3 632 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 GOLGA8NF8WBI6 632 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 NPTXRO95502 500 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PNPLA4P41247 253 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ELF3P78545 371 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 FSCN1Q16658 493 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 LRRC23Q53EV4 343 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 HEATR6Q6AI08 1181 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CDKL3Q8IVW4 592 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 C1orf131Q8NDD1 294 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 TRPV6Q9H1D0 765 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 FANCGO15287 622 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 SHOX2O60902 331 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 NPY5RQ15761 445 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 NLRP9Q7RTR0 991 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PPIL6Q8IXY8 311 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 NSL1Q96IY1 281 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 KCTD10Q9H3F6 313 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 DHX35Q9H5Z1 703 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ANLNQ9NQW6 1124 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ABCF3Q9NUQ8 709 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PCMTD2Q9NV79 361 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
COLCA1-201ENST00000355430 ZC3H7BQ9UGR2 993 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 FNDC3AQ9Y2H6 1198 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 MTO1Q9Y2Z2 717 aaKnown RBP12.87□□□□□ -0.35
COLCA1-201ENST00000355430 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 IGSF9BQ9UPX0 1349 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 WEE2P0C1S8 567 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 KCNA3P22001 575 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms