RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ERP44Q9BS26 406 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 GRID1Q9ULK0 1009 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 SPHKAPQ2M3C7 1700 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 MBL2P11226 248 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 MAPRE1Q15691 268 aaKnown RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ERP27Q96DN0 273 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 SGSM3Q96HU1 749 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 AAASQ9NRG9 546 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 C6orf203Q9P0P8 240 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 OGTO15294 1046 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ENDOD1O94919 500 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 STAG3L1P0CL83 205 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 PCYOX1LQ8NBM8 494 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 INPP5DQ92835 1189 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 FAM129AQ9BZQ8 928 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 CYB561D2O14569 222 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 DNAL1Q4LDG9 190 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 KCNT1Q5JUK3 1230 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 MTSS1O43312 755 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ASS1P00966 412 aaKnown RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 KCNK10P57789 538 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 PPP4CP60510 307 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ARMC2Q8NEN0 867 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 FBXO32Q969P5 355 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 GPATCH2LQ9NWQ4 482 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 WWOXQ9NZC7 414 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 SPASTQ9UBP0 616 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 MORC2Q9Y6X9 1032 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 LOC100653049A0A140TA62 436 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 FOXN3O00409 490 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ZBTB39O15060 712 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 KRT34O76011 436 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 BOLA3Q53S33 107 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ZNF484Q5JVG2 852 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 CARNMT1Q8N4J0 409 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 DAGLBQ8NCG7 672 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 EME1Q96AY2 570 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 POP1Q99575 1024 aaKnown RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 MANSC1Q9H8J5 431 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 ENTPD7Q9NQZ7 604 aa13.74□□□□□ -0.21
SCN8A-202ENST00000355133 PNMA8BQ9ULN7 279 aaPredicted RBP13.74□□□□□ -0.21
SCN8A-202ENST00000355133 IQSEC2Q5JU85 1478 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 F5H5T6 163 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 ANXA9O76027 345 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 PON1P27169 355 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TRIM48Q8IWZ4 208 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 E2F7Q96AV8 911 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 C17orf75Q9HAS0 396 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 GAS2O43903 313 aaKnown RBP13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TROAPQ12815 778 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 INTS5Q6P9B9 1019 aaKnown RBP13.73□□□□□ -0.21
SCN8A-202ENST00000355133 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 PRUNE1Q86TP1 453 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 LINC00523Q86TU6 105 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 PRPF39Q86UA1 669 aaKnown RBP13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TPCN2Q8NHX9 752 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 PLEKHA8Q96JA3 519 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 GIMAP4Q9NUV9 329 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 RIC8BQ9NVN3 520 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 H7C4K7 107 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TGM2P21980 687 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 BACE1P56817 501 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 HPCAP84074 193 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 AGBL2Q5U5Z8 902 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 SEPT8Q92599 483 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 OLFM3Q96PB7 478 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 ZIM3Q96PE6 472 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 KCTD10Q9H3F6 313 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 NMRK2Q9NPI5 230 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TRIM49D1C9J1S8 452 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 KLHL2O95198 593 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
SCN8A-202ENST00000355133 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
SCN8A-202ENST00000355133 HORMAD1Q86X24 394 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 ADGRF2Q8IZF7 708 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 KCTD17Q8N5Z5 321 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 CACNA2D2Q9NY47 1150 aa13.73□□□□□ -0.21
SCN8A-202ENST00000355133 TRMT6Q9UJA5 497 aaKnown RBP13.73□□□□□ -0.21
SCN8A-202ENST00000355133 NCF1BA6NI72 391 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 NCF1CA8MVU1 366 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 CYP2C8P10632 490 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SLC2A3P11169 496 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 NCF1P14598 390 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 NPTX2P47972 431 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 C9orf131Q5VYM1 1079 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 ATG4AQ8WYN0 398 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
SCN8A-202ENST00000355133 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 FOXP3Q9BZS1 431 aa13.72□□□□□ -0.21
SCN8A-202ENST00000355133 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms