RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TAP1Q03518 808 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 STILQ15468 1287 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 GKAP1Q5VSY0 366 aaPredicted RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 RCOR2Q8IZ40 523 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 MCOLN2Q8IZK6 566 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 DEPDC1BQ8WUY9 529 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 TTC17Q96AE7 1141 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 GCNAQ96QF7 691 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 RBM15Q96T37 977 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 ALG13Q9NP73 1137 aaKnown RBP12.95□□□□□ -0.34
PCDHB11-201ENST00000354757 TLR2O60603 784 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 PHF2O75151 1096 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 CLEC16AQ2KHT3 1053 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 ZACNQ401N2 412 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 ACCSLQ4AC99 568 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 PALB2Q86YC2 1186 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 CCHCR1Q8TD31 782 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 CCT6BQ92526 530 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 CEP41Q9BYV8 373 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 STK38LQ9Y2H1 464 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 KPNA7A9QM74 516 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 PNPLA4P41247 253 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 NCKAP1LP55160 1127 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 ATP13A4Q4VNC1 1196 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 C6orf163Q5TEZ5 329 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 PPP4R1Q8TF05 950 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 C18orf25Q96B23 403 aaPredicted RBP12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 SNF8Q96H20 258 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 KLF6Q99612 283 aaPredicted RBP12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 ASB7Q9H672 318 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 TJP2Q9UDY2 1190 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 F8VP50 259 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 LYPLA2O95372 231 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 HNRNPH1P31943 449 aaKnown RBP12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 IRAK1P51617 712 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 ALS2CLQ60I27 953 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 TMEM121Q9BTD3 319 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
PCDHB11-201ENST00000354757 AOC2O75106 756 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SPAG7O75391 227 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 MMP3P08254 477 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 MARCKSL1P49006 195 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 THOC5Q13769 683 aaKnown RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SNCBQ16143 134 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 LONRF1Q17RB8 773 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 OR6P1Q8NGX9 317 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 EPAS1Q99814 870 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SLC13A1Q9BZW2 595 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 DHX33Q9H6R0 707 aaKnown RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 HAUS2Q9NVX0 235 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 ST3GAL5Q9UNP4 418 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 MROH7Q68CQ1 1323 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 FAM187AA6NFU0 413 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 E5RJQ4 531 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 GSTA1P08263 222 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 GSTA2P09210 222 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 PYGMP11217 842 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 ADIGQ0VDE8 80 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 PCSK7Q16549 785 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 WSCD1Q658N2 575 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 ANKRD23Q86SG2 305 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SP110Q9HB58 689 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SAE1Q9UBE0 346 aaPredicted RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 FAM8A1Q9UBU6 413 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 BARX2Q9UMQ3 279 aaPredicted RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 TBKBP1A7MCY6 615 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 PDE2AO00408 941 aaPredicted RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 GLI1P08151 1106 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 PRKCZQ05513 592 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 DHX34Q14147 1143 aaKnown RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 HIF1AQ16665 826 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 OVOS1Q6IE37 1185 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 FBXO25Q8TCJ0 367 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 KREMEN1Q96MU8 473 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SYT15Q9BQS2 421 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 RSAD1Q9HA92 442 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 GEMIN8Q9NWZ8 242 aaKnown RBP12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 KLHL14Q9P2G3 628 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 SUFUQ9UMX1 484 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 TNFSF13BQ9Y275 285 aa12.93□□□□□ -0.34
PCDHB11-201ENST00000354757 C10orf71Q711Q0 1435 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms