RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TMEM86AQ8N2M4 240 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 GPD1LQ8N335 351 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 PDILTQ8N807 584 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 SECISBP2LQ93073 1101 aaKnown RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 TRMT2BQ96GJ1 504 aaKnown RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 ABCB6Q9NP58 842 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 TDP1Q9NUW8 608 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 POLR3BQ9NW08 1133 aaPredicted RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 MAGED2Q9UNF1 606 aaPredicted RBP17.04■□□□□ 0.32
PDGFA-201ENST00000354513 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 SNX9Q9Y5X1 595 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 LAMA1P25391 3075 aa17.04■□□□□ 0.32
PDGFA-201ENST00000354513 PRR5-ARHGAP8B1AHC4 643 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 ATP2C2O75185 946 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 RETP07949 1114 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 CSH1P0DML2 217 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 CSH2P0DML3 217 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 ARHGAP8P85298 464 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 ZNF268Q14587 947 aaPredicted RBP17.03■□□□□ 0.32
PDGFA-201ENST00000354513 ZNF77Q15935 545 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 TAF12Q16514 161 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 FAM171BQ6P995 826 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 SYNPOQ8N3V7 929 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 FAM160A2Q8N612 972 aaPredicted RBP17.03■□□□□ 0.32
PDGFA-201ENST00000354513 CSGALNACT2Q8N6G5 542 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 KIF9Q9HAQ2 790 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 INTS13Q9NVM9 706 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 ZMYM5Q9UJ78 669 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 NUP205Q92621 2012 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
PDGFA-201ENST00000354513 KMT2BQ9UMN6 2715 aaPredicted RBP17.03■□□□□ 0.32
PDGFA-201ENST00000354513 DCDC2BA2VCK2 349 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 SOBPA7XYQ1 873 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 TRDMT1O14717 391 aaKnown RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 HUS1O60921 280 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 EGFP01133 1207 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 AVPR1AP37288 418 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 MYL7Q01449 175 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 EPM2AIP1Q7L775 607 aaPredicted RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 LINC00301Q8NCQ3 95 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 SPATA18Q8TC71 538 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 GZF1Q9H116 711 aaPredicted RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 CRTAC1Q9NQ79 661 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 SEMA4GQ9NTN9 838 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 THG1LQ9NWX6 298 aaKnown RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 GCNT4Q9P109 453 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 CDV3Q9UKY7 258 aaKnown RBP17.02■□□□□ 0.32
PDGFA-201ENST00000354513 RAB23Q9ULC3 237 aa17.02■□□□□ 0.32
PDGFA-201ENST00000354513 LRP3O75074 770 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 KRT19P08727 400 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 TMEM191BP0C7N4 346 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 LMO2P25791 158 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 CNR2P34972 360 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
PDGFA-201ENST00000354513 PSMC1P62191 440 aaKnown RBP17.01■□□□□ 0.31
PDGFA-201ENST00000354513 RBP5P82980 135 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 MTF1Q14872 753 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 PRR23CQ6ZRP0 262 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
PDGFA-201ENST00000354513 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
PDGFA-201ENST00000354513 MYLPFQ96A32 169 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 RTKNQ9BST9 563 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 TRIM9Q9C026 710 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 TMEM206Q9H813 350 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 PLXND1Q9Y4D7 1925 aa17.01■□□□□ 0.31
PDGFA-201ENST00000354513 C2orf78A6NCI8 922 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 TGFB1I1O43294 461 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 GDF9O60383 454 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 RNF40O75150 1001 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 GJA4P35212 333 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 USP46P62068 366 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 RPL10AP62906 217 aaKnown RBP17■□□□□ 0.31
PDGFA-201ENST00000354513 ZXDBP98169 803 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 CSRP2Q16527 193 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17■□□□□ 0.31
PDGFA-201ENST00000354513 CCDC65Q8IXS2 484 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 FUBP3Q96I24 572 aaKnown RBP eCLIP17■□□□□ 0.31
PDGFA-201ENST00000354513 SYT15Q9BQS2 421 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 HSPBP1Q9NZL4 362 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 WNT6Q9Y6F9 365 aa17■□□□□ 0.31
PDGFA-201ENST00000354513 ANTXRLA6NF34 631 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
PDGFA-201ENST00000354513 STX6O43752 255 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 SDHBP21912 280 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 MAGEA11P43364 429 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 LHX1P48742 406 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 GALK1P51570 392 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 FAM160A1Q05DH4 1040 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 EHHADHQ08426 723 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms