RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 PTGISQ16647 500 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 KYNUQ16719 465 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 ZNF365Q70YC5 407 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 CATSPER4Q7RTX7 472 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 NIPA2Q8N8Q9 360 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 RBM41Q96IZ5 413 aaKnown RBP16.4■□□□□ 0.22
MBD1-205ENST00000353909 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
MBD1-205ENST00000353909 ANAPC5Q9UJX4 755 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 STRIP2Q9ULQ0 834 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
MBD1-205ENST00000353909 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
MBD1-205ENST00000353909 GRAP2O75791 330 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 KLRC2P26717 231 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 RBP5P82980 135 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 BEX3Q00994 111 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 LRRC38Q5VT99 294 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 TRNP1Q6NT89 227 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 GRK7Q8WTQ7 553 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 DNAJB3Q8WWF6 145 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 MRPL45Q9BRJ2 306 aaKnown RBP16.39■□□□□ 0.21
MBD1-205ENST00000353909 FAM107BQ9H098 131 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
MBD1-205ENST00000353909 BARX2Q9UMQ3 279 aaPredicted RBP16.39■□□□□ 0.21
MBD1-205ENST00000353909 ZNF148Q9UQR1 794 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 GRM5P41594 1212 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 BYSLQ13895 437 aaKnown RBP16.39■□□□□ 0.21
MBD1-205ENST00000353909 LONRF1Q17RB8 773 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 P3H1Q32P28 736 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 CCDC38Q502W7 563 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 TFDP3Q5H9I0 405 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 TSPAN16Q9UKR8 245 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 SNX9Q9Y5X1 595 aa16.39■□□□□ 0.21
MBD1-205ENST00000353909 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 TJP3O95049 919 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 F2P00734 622 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 RGS7P49802 495 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 CDR1P51861 262 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 TMEM121Q9BTD3 319 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 CYP3A43Q9HB55 503 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 FEZ2Q9UHY8 353 aaPredicted RBP16.38■□□□□ 0.21
MBD1-205ENST00000353909 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 TREHO43280 583 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 PFKMP08237 780 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 CYP2C9P11712 490 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 FKBP1BP68106 108 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 TAP1Q03518 808 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 INCA1Q0VD86 236 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 CNGA2Q16280 664 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 IZUMO3Q5VZ72 239 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 TLK2Q86UE8 772 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 TRAIPQ9BWF2 469 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 ADAM7Q9H2U9 754 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 HOMER3Q9NSC5 361 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 FAM49BQ9NUQ9 324 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 KLK14Q9P0G3 267 aa16.38■□□□□ 0.21
MBD1-205ENST00000353909 E5RJQ4 531 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 VDRP11473 427 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 HUNKP57058 714 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 MORN1Q5T089 497 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 PPP1R26Q5T8A7 1209 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 FAM102AQ5T9C2 384 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 SYDE1Q6ZW31 735 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 HOOK3Q86VS8 718 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 C9orf72Q96LT7 481 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 EPN3Q9H201 632 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 CTNNAL1Q9UBT7 734 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 ZNF865P0CJ78 1059 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 CYP2B6P20813 491 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 AUHQ13825 339 aaKnown RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 HP1BP3Q5SSJ5 553 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 CCDC89Q8N998 374 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 PGM2Q96G03 612 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 GCOM2Q9BZD3 368 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 SLC5A4Q9NY91 659 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 E7EVH7 732 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 RGS16O15492 202 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 HMGCRP04035 888 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 P4HA1P13674 534 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 MIPP30301 263 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 PLCB3Q01970 1234 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 C15orf59Q2T9L4 293 aaPredicted RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 B4GALNT4Q76KP1 1039 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 SRLQ86TD4 932 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 ARFGAP2Q8N6H7 521 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 MCRS1Q96EZ8 462 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 SNX27Q96L92 541 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 PEBP4Q96S96 227 aa16.37■□□□□ 0.21
MBD1-205ENST00000353909 RRP15Q9Y3B9 282 aaKnown RBP16.37■□□□□ 0.21
MBD1-205ENST00000353909 RASGRF2O14827 1237 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 CETN2P41208 172 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 ARSEP51690 589 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 MAP2K5Q13163 448 aa16.36■□□□□ 0.21
MBD1-205ENST00000353909 ZNF268Q14587 947 aaPredicted RBP16.36■□□□□ 0.21
MBD1-205ENST00000353909 OASLQ15646 514 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms