RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ARHGEF37A1IGU5 675 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 LRRD1A4D1F6 860 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TM9SF1O15321 606 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CHADO15335 359 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 MICAL2O94851 1124 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CD58P19256 250 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 DRD4P21917 467 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SLC8A1P32418 973 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 GJC1P36383 396 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 FLT3P36888 993 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ZNF143P52747 638 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 AIF1P55008 147 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 IRX5P78411 483 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 ACVR2BQ13705 512 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SPARCL1Q14515 664 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SETDB1Q15047 1291 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TAZQ16635 292 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 DBN1Q16643 649 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SV2CQ496J9 727 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 LMBRD2Q68DH5 695 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 SPOPLQ6IQ16 392 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 NOTUMQ6P988 496 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 MAMDC4Q6UXC1 1216 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TRMT1LQ7Z2T5 733 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 PSTKQ8IV42 348 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 SUGP1Q8IWZ8 645 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 OR5B17Q8NGF7 314 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 OR2W6PQ8NHA6 318 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SLC10A4Q96EP9 437 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 MCRS1Q96EZ8 462 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 PLEKHA4Q9H4M7 779 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 RNF181Q9P0P0 153 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TCRBV5S1A1TA0A578 114 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SLC15A5A6NIM6 579 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 HACD1B0YJ81 288 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ABLIM1O14639 778 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 APOL1O14791 398 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 DCTN3O75935 186 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 VIMP08670 466 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 HOXD8P13378 290 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 NR2C2P49116 596 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 GEMIN4P57678 1058 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 ARHGAP1Q07960 439 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 XRCC4Q13426 336 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 HIF1AQ16665 826 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 PDZD4Q76G19 769 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 ANKS1BQ7Z6G8 1248 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 XYLT1Q86Y38 959 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 DNAAF5Q86Y56 855 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 NME8Q8N427 588 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 LINC01465Q8N7H1 131 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SPATA18Q8TC71 538 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ZNF398Q8TD17 642 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ARHGEF2Q92974 986 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 LRRC39Q96DD0 335 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 HPDLQ96IR7 371 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ZBTB45Q96K62 511 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 HEXIM2Q96MH2 286 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 RBM15Q96T37 977 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNF38-203ENST00000353739 HINFPQ9BQA5 517 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SH2D3AQ9BRG2 576 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 PDZD7Q9H5P4 517 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SAYSD1Q9NPB0 183 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 KCNK9Q9NPC2 374 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TXLNGQ9NUQ3 528 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 RCOR3Q9P2K3 495 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 DDX20Q9UHI6 824 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 UBQLN1Q9UMX0 589 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNF38-203ENST00000353739 Q9Y3F1 56 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SMIM35A0A1B0GVV1 85 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 FAM47DPA6NHR8 397 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CCT8L1PA6NM43 557 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 LACTBL1A8MY62 500 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 AP3B1O00203 1094 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 ALOX15BO15296 676 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TRUB2O95900 331 aaKnown RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 KDELR1P24390 212 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CNTFP26441 200 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 MARK3P27448 753 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 EPHX2P34913 555 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CDKN2BP42772 138 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CPT1AP50416 773 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 RASSF2P50749 326 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 TAS2R40P59535 323 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 JADE1Q6IE81 842 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SLC27A1Q6PCB7 646 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 LCLAT1Q6UWP7 414 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 RGS9BPQ6ZS82 235 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 FBXO16Q8IX29 292 aaPredicted RBP3.91□□□□□ -1.78
RNF38-203ENST00000353739 PALM2Q8IXS6 379 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 PDIK1LQ8N165 341 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 OR6J1Q8NGC5 347 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 CFAP61Q8NHU2 1237 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 MAGEC3Q8TD91 643 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 PPP1R2P1Q96PQ5 205 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 SEMA4AQ9H3S1 761 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 VPS37BQ9H9H4 285 aa3.91□□□□□ -1.78
RNF38-203ENST00000353739 METTL5Q9NRN9 209 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms