RNA–Protein interactions for RNA: ENST00000353247.9

CASP1-201, Transcript of caspase 1, humanhuman

TSL 1 (best) BASIC

Gene CASP1, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-201ENST00000353247 CPVLQ9H3G5 476 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 LTB4R2Q9NPC1 389 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 HELLSQ9NRZ9 838 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 ZBTB40Q9NUA8 1239 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 ZDHHC7Q9NXF8 308 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 DDX19BQ9UMR2 479 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 NOVA2Q9UNW9 492 aaKnown RBP3.92□□□□□ -1.78
CASP1-201ENST00000353247 NUMBLQ9Y6R0 609 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 ANKRD17O75179 2603 aaKnown RBP3.92□□□□□ -1.78
CASP1-201ENST00000353247 LAMA4Q16363 1823 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 NBASA2RRP1 2371 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 TLN1Q9Y490 2541 aaKnown RBP3.92□□□□□ -1.78
CASP1-201ENST00000353247 TTC41PQ6P2S7 1318 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 NOTCH4Q99466 2003 aa3.92□□□□□ -1.78
CASP1-201ENST00000353247 TDRD15B5MCY1 1934 aaKnown RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 MYO18AQ92614 2054 aaKnown RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 COL1A2P08123 1366 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 THADAQ6YHU6 1953 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 USP9YO00507 2555 aaPredicted RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 SETD2Q9BYW2 2564 aaPredicted RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 LRBAP50851 2863 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 EIF4E1BA6NMX2 242 aaKnown RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 NT5C1B-RDH14C9J2C7 533 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 ZNF213O14771 459 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 INPPL1O15357 1258 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 ATP9AO75110 1047 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 ZNF623O75123 536 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 ZC3H11AO75152 810 aaKnown RBP eCLIP3.91□□□□□ -1.78
CASP1-201ENST00000353247 GPR32O75388 356 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 GLUD1P00367 558 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 RLBP1P12271 317 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 CEACAM1P13688 526 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 HOXA6P31267 233 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 PBX3P40426 434 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 CXCL12P48061 93 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 MLLT6P55198 1093 aaPredicted RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 CREMQ03060 361 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 RNASELQ05823 741 aaKnown RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 MTAPQ13126 283 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 WTAPQ15007 396 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 MCMDC2Q4G0Z9 681 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 STPG1Q5TH74 334 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 DAB2IPQ5VWQ8 1189 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 FAM160B1Q5W0V3 765 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 LETMD1Q6P1Q0 360 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 CAPN12Q6ZSI9 719 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 LONP2Q86WA8 852 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 SMARCC2Q8TAQ2 1214 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 PGBD4Q96DM1 585 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 POM121Q96HA1 1249 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 SDF4Q9BRK5 362 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 RIOX1Q9H6W3 641 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 MAN1C1Q9NR34 630 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.91□□□□□ -1.78
CASP1-201ENST00000353247 SLC9A2Q9UBY0 812 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 CDH7Q9ULB5 785 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 KCNH3Q9ULD8 1083 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 CEP131Q9UPN4 1083 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 MTF2Q9Y483 593 aaPredicted RBP3.91□□□□□ -1.78
CASP1-201ENST00000353247 PCDHGA5Q9Y5G8 931 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 DOPEY2Q9Y3R5 2298 aa3.91□□□□□ -1.78
CASP1-201ENST00000353247 CCDC163A0A0D9SF12 145 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 RBAK-RBAKDNI3L0D1 243 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 FOXP2O15409 715 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 PPP1R11O60927 126 aaPredicted RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 LRRN2O75325 713 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 PAPSS2O95340 614 aaPredicted RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 ATG7O95352 703 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 PLATP00750 562 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 SOD2P04179 222 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 URODP06132 367 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 HNRNPA1P09651 372 aaKnown RBP eCLIP3.9□□□□□ -1.79
CASP1-201ENST00000353247 TDGF1P13385 188 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 SMARCA1P28370 1054 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 AK2P54819 239 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 NLRP11P59045 1033 aaKnown RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 ACTR2P61160 394 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 KIZQ2M2Z5 673 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 NOMO2Q5JPE7 1267 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 CLLU1OSQ5K130 101 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 AXDND1Q5T1B0 1012 aaPredicted RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 IFIT1BQ5T764 474 aaKnown RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 CRYBG3Q68DQ2 2970 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 TSSK4Q6SA08 328 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 PARM1Q6UWI2 310 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 UBE3DQ7Z6J8 389 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 FAM228AQ86W67 206 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 SPEM1Q8N4L4 309 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 METTL13Q8N6R0 699 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 ENAHQ8N8S7 591 aaPredicted RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 RNF169Q8NCN4 708 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 URGCPQ8TCY9 931 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 AUTS2Q8WXX7 1259 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 DNASE1L2Q92874 299 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 FGF14Q92915 247 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 EVI5LQ96CN4 794 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 FAM193BQ96PV7 902 aaPredicted RBP3.9□□□□□ -1.79
CASP1-201ENST00000353247 MAP7D2Q96T17 732 aa3.9□□□□□ -1.79
CASP1-201ENST00000353247 TMEM175Q9BSA9 504 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms