RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PPP3CAQ08209 521 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 ZACNQ401N2 412 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 SLC47A2Q86VL8 602 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 TATDN2Q93075 761 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 RGS7P49802 495 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CRYBB1P53674 252 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 RIBC1Q8N443 379 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 EIF1ADQ8N9N8 165 aaKnown RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 ZNF606Q8WXB4 792 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 MS4A14Q96JA4 679 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 FAM96AQ9H5X1 160 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CATSPERBQ9H7T0 1116 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 GRM5P41594 1212 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-201ENST00000350148 HGSO14964 777 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-201ENST00000350148 SASH3O75995 380 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 ADRB2P07550 413 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 SESN3P58005 492 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 NME3Q13232 169 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 NFE2Q16621 373 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-201ENST00000350148 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 AGBL2Q5U5Z8 902 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 GLIS3Q8NEA6 775 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-201ENST00000350148 SEZ6Q53EL9 994 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 ATG16L1Q676U5 607 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 RAB44Q7Z6P3 723 aaPredicted RBP12.73□□□□□ -0.37
SMAD9-201ENST00000350148 STKLD1Q8NE28 680 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 LAMB2P55268 1798 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 SP3Q02447 781 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 KCNA1Q09470 495 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 GEN1Q17RS7 908 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 CYFIP2Q96F07 1278 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 FAM49BQ9NUQ9 324 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 SNTG2Q9NY99 539 aa12.73□□□□□ -0.37
SMAD9-201ENST00000350148 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 TTI1O43156 1089 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 RAD51CO43502 376 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 EGFRP00533 1210 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 AGTP01019 485 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 E2F5Q15329 346 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 HIF1AQ16665 826 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 SLC20A1Q8WUM9 679 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 RAB3IPQ96QF0 476 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 MRPL9Q9BYD2 267 aaKnown RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 ZNF536O15090 1300 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 MYH14Q7Z406 1995 aaKnown RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 A0A0B4J269 797 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 H3BQF6 201 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 ACSL3O95573 720 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 SPIRE1Q08AE8 756 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 DGKZQ13574 1117 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 PDCD2Q16342 344 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 TAB3Q8N5C8 712 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 CFAP36Q96G28 342 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 GGCXP38435 758 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 PRMT2P55345 433 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 MAPK7Q13164 816 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 JADE1Q6IE81 842 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 RIN2Q8WYP3 895 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 SCYL1Q96KG9 808 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 PDGFDQ9GZP0 370 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 CDT1Q9H211 546 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 ARAP2Q8WZ64 1704 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 EEF2KO00418 725 aaKnown RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 TSHZ1Q6ZSZ6 1077 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
SMAD9-201ENST00000350148 LRRC52Q8N7C0 313 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 VPS39Q96JC1 886 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 DMAC2Q9NW81 257 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 WHRNQ9P202 907 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
SMAD9-201ENST00000350148 B4GALT4O60513 344 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 ERBB2P04626 1255 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 MMP3P08254 477 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.37
SMAD9-201ENST00000350148 DYTNA2CJ06 578 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 RRM1P23921 792 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 OR1G1P47890 313 aa12.71□□□□□ -0.37
SMAD9-201ENST00000350148 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.37
SMAD9-201ENST00000350148 RPL10AP62906 217 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms