RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PIGHQ14442 188 aaPredicted RBP19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 TRIM50Q86XT4 487 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 MICALL2Q8IY33 904 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 SCYL3Q8IZE3 742 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 TCP10LQ8TDR4 215 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 PTPRN2Q92932 1015 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 R3HDMLQ9H3Y0 253 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 UBN1Q9NPG3 1134 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 PSMC3IPQ9P2W1 217 aaPredicted RBP19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 ZMYND8Q9ULU4 1186 aaPredicted RBP19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 ADAMTS5Q9UNA0 930 aa19.01■□□□□ 0.63
PTP4A3-202ENST00000349124 PIK3R2O00459 728 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 MSCO60682 206 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 ATG7O95352 703 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 KRT3P12035 628 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 EPHB2P29323 1055 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 GEMIN4P57678 1058 aaKnown RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 LACTBP83111 547 aaPredicted RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 NR1H3Q13133 447 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 STXBP2Q15833 593 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 TAF1BQ53T94 588 aaPredicted RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 MTDHQ86UE4 582 aaKnown RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 TMEM192Q8IY95 271 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 RFWD2Q8NHY2 731 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 LRRN4Q8WUT4 740 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 NIF3L1Q9GZT8 377 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 SUFUQ9UMX1 484 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 FER1L6Q2WGJ9 1857 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 WDR81Q562E7 1941 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 ATP11AP98196 1134 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 SLC25A11Q02978 314 aaKnown RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 CCDC15Q0P6D6 951 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 EFHC2Q5JST6 749 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 SH3PXD2AQ5TCZ1 1133 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 NPNTQ6UXI9 565 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 ZNF276Q8N554 614 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 PAFAH2Q99487 392 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 TBC1D10AQ9BXI6 508 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 PICK1Q9NRD5 415 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 KANSL3Q9P2N6 904 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 SMG5Q9UPR3 1016 aaKnown RBP19■□□□□ 0.63
PTP4A3-202ENST00000349124 SHOC2Q9UQ13 582 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 GJA3Q9Y6H8 435 aa19■□□□□ 0.63
PTP4A3-202ENST00000349124 UBA1P22314 1058 aaKnown RBP18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 MMRN1Q13201 1228 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 TRPC3Q13507 836 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 NAT8LQ8N9F0 302 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 RSRC1Q96IZ7 334 aaKnown RBP18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 CPXM1Q96SM3 734 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 AVILO75366 819 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 ASPAP45381 313 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 PSMC1P62191 440 aaKnown RBP18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 TARBP2Q15633 366 aaKnown RBP18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 DUOXA2Q1HG44 320 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 LONP2Q86WA8 852 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 RNF149Q8NC42 400 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 FAM13CQ8NE31 585 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 JDP2Q8WYK2 163 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 HSPH1Q92598 858 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 NIFKQ9BYG3 293 aaKnown RBP18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 XYLT2Q9H1B5 865 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 TXLNGQ9NUQ3 528 aa18.99■□□□□ 0.63
PTP4A3-202ENST00000349124 C2orf71A6NGG8 1288 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 ATP2A1O14983 1001 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 B4GALT5O43286 388 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 CSDE1O75534 798 aaKnown RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 KRT19P08727 400 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 KDELR1P24390 212 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 DLK2Q6UY11 383 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 CATSPERGQ6ZRH7 1159 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 LRRC6Q86X45 466 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 WDR49Q8IV35 697 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 RSAD2Q8WXG1 361 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 CYLDQ9NQC7 956 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 STK32BQ9NY57 414 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 HMGXB4Q9UGU5 601 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 CHMP2BQ9UQN3 213 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 SPDYE16A6NNV3 312 aaPredicted RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 STAM2O75886 525 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 SKIV2L2P42285 1042 aaKnown RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 GMPSP49915 693 aaPredicted RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 STAT5BP51692 787 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 BASP1P80723 227 aaKnown RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 LY6KQ17RY6 165 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 SGSM1Q2NKQ1 1148 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 ZNF699Q32M78 642 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 ANKRD20A2Q5SQ80 823 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 ANKRD20A1Q5TYW2 823 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 ANKRD20A3Q5VUR7 823 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 DPH6Q7L8W6 267 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 PPIL6Q8IXY8 311 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 TTC8Q8TAM2 541 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 PRR11Q96HE9 360 aaPredicted RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 ACO2Q99798 780 aaKnown RBP18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 LRMDAQ9H2I8 198 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 GINM1Q9NU53 330 aa18.98■□□□□ 0.63
PTP4A3-202ENST00000349124 SLC24A2Q9UI40 661 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms