RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
SMC4-201ENST00000344722 EFNA5P52803 228 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 PTK2BQ14289 1009 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.78■□□□□ 0.65e-13■■■■■ 220.5
SMC4-201ENST00000344722 PARD3BQ8TEW8 1205 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 CNKSR1Q969H4 720 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 FAM162AQ96A26 154 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 OLA1Q9NTK5 396 aaKnown RBP18.78■□□□□ 0.6
SMC4-201ENST00000344722 ATXN10Q9UBB4 475 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 NEXMIFQ5QGS0 1516 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 ARAP3Q8WWN8 1544 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 CYP11B1P15538 503 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 CRKP46108 304 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 NME3Q13232 169 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 INAQ16352 499 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 SMTNL2Q2TAL5 461 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 EPS8L2Q9H6S3 715 aa18.78■□□□□ 0.6
SMC4-201ENST00000344722 A0A087X0B3 334 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 A0A1B0GW55 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 E2F8A0AVK6 867 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 HUS1O60921 280 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 PROSCO94903 275 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4L2P0CJ85 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4L3P0CJ86 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4L4P0CJ87 422 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4L5P0CJ88 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4L6P0CJ89 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4L7P0CJ90 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 FCGR1AP12314 374 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 PARP6Q2NL67 630 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 CWF19L1Q69YN2 538 aaKnown RBP18.77■□□□□ 0.6
SMC4-201ENST00000344722 ZNF398Q8TD17 642 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 TOPORSQ9NS56 1045 aaPredicted RBP18.77■□□□□ 0.6
SMC4-201ENST00000344722 DUX4Q9UBX2 424 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 RALBP11234 206 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
SMC4-201ENST00000344722 FDFT1P37268 417 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 AUHQ13825 339 aaKnown RBP18.77■□□□□ 0.6
SMC4-201ENST00000344722 STXBP2Q15833 593 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 SEL1L3Q68CR1 1132 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 NSUN6Q8TEA1 469 aaKnown RBP18.77■□□□□ 0.6
SMC4-201ENST00000344722 AGAP3Q96P47 875 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 IL1RL2Q9HB29 575 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 USP32Q8NFA0 1604 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 DGAT1O75907 488 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 EPC2Q52LR7 807 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 C16orf86Q6ZW13 317 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 EFL1Q7Z2Z2 1120 aaKnown RBP18.77■□□□□ 0.6
SMC4-201ENST00000344722 GLMNQ92990 594 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 LRMDAQ9H2I8 198 aa18.77■□□□□ 0.6
SMC4-201ENST00000344722 ASNSP08243 561 aa18.77■□□□□ 0.59
SMC4-201ENST00000344722 NCALDP61601 193 aa18.77■□□□□ 0.59
SMC4-201ENST00000344722 LBRQ14739 615 aaKnown RBP18.77■□□□□ 0.59
SMC4-201ENST00000344722 GJC2Q5T442 439 aaPredicted RBP18.77■□□□□ 0.59
SMC4-201ENST00000344722 AFF2P51816 1311 aa18.77■□□□□ 0.59
SMC4-201ENST00000344722 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 DNALI1O14645 258 aaPredicted RBP18.76■□□□□ 0.59
SMC4-201ENST00000344722 GPD1P21695 349 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 PKN1Q16512 942 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 TMC5Q6UXY8 1006 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 CLVS1Q8IUQ0 354 aaPredicted RBP18.76■□□□□ 0.59
SMC4-201ENST00000344722 P3H2Q8IVL5 708 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 ZNF341Q9BYN7 854 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 COPG2Q9UBF2 871 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 CEMIPQ8WUJ3 1361 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 TFE3P19532 575 aaPredicted RBP18.76■□□□□ 0.59
SMC4-201ENST00000344722 RASA1P20936 1047 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 KYAT1Q16773 422 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 C6orf10Q5SRN2 563 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 DEPDC1Q5TB30 811 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 HOMEZQ8IX15 550 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 PCDH9Q9HC56 1237 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 BTNL10A8MVZ5 291 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 TPST1O60507 370 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 SHBGP04278 402 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 ZNF23P17027 643 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 PTK6Q13882 451 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 KRT72Q14CN4 511 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 RC3H1Q5TC82 1133 aaKnown RBP18.76■□□□□ 0.59
SMC4-201ENST00000344722 GPAT2Q6NUI2 795 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 DSTYKQ6XUX3 929 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 SULF1Q8IWU6 871 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 TUBGCP3Q96CW5 907 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 SH3GL1Q99961 368 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 KCNK4Q9NYG8 393 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 SIK3Q9Y2K2 1263 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 POLD1P28340 1107 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 PDK1Q15118 436 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 WDR59Q6PJI9 974 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 CCDC81Q6ZN84 652 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 TMEM139Q8IV31 216 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 LENG1Q96BZ8 264 aaPredicted RBP18.76■□□□□ 0.59
SMC4-201ENST00000344722 PPP1R16BQ96T49 567 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 ZMYND8Q9ULU4 1186 aaPredicted RBP18.76■□□□□ 0.59
SMC4-201ENST00000344722 PCDHA3Q9Y5H8 950 aa18.76■□□□□ 0.59
SMC4-201ENST00000344722 MYO1GB0I1T2 1018 aa18.75■□□□□ 0.59
SMC4-201ENST00000344722 CASP4P49662 377 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms