RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 ELOVL4Q9GZR5 314 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 LHX5Q9H2C1 402 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 SMARCAD1Q9H4L7 1026 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 PCSK1NQ9UHG2 260 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 AGTPBP1Q9UPW5 1226 aa22.53■■□□□ 1.2
CCDC38-201ENST00000344280 C22orf31O95567 290 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 STAG3L1P0CL83 205 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 GHRP10912 638 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 IREB2P48200 963 aaKnown RBP22.52■■□□□ 1.2
CCDC38-201ENST00000344280 MOGSQ13724 837 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 ERO1BQ86YB8 467 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 ZBED8Q8IZ13 594 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 CCDC77Q9BR77 488 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 NSRP1Q9H0G5 558 aaKnown RBP22.52■■□□□ 1.2
CCDC38-201ENST00000344280 KIF9Q9HAQ2 790 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 KLC4Q9NSK0 619 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.52■■□□□ 1.2
CCDC38-201ENST00000344280 HBP1O60381 514 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 CST8O60676 142 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 MTM1Q13496 603 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 FAM182AQ5T1J6 154 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 TRPM8Q7Z2W7 1104 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 POLNQ7Z5Q5 900 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 EXOC8Q8IYI6 725 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 P3H4Q92791 437 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 CFAP57Q96MR6 1250 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 FOXP3Q9BZS1 431 aa22.52■■□□□ 1.2
CCDC38-201ENST00000344280 POC1B-GALNT4F8VUJ3 575 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 MORF4L2Q15014 288 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 FAM133BQ5BKY9 247 aaKnown RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 ANKRD22Q5VYY1 191 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 ICE2Q659A1 982 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 FUKQ8N0W3 1084 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 PRCCQ92733 491 aaPredicted RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 MRRFQ96E11 262 aaKnown RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 PCDH9Q9HC56 1237 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 SLC12A4Q9UP95 1085 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 A0A087WZ62 844 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 SPAG7O75391 227 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 INSRRP14616 1297 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 KDELR1P24390 212 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 POLR2BP30876 1174 aaKnown RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 PTPN11Q06124 597 aaPredicted RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 AMHR2Q16671 573 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 TGS1Q96RS0 853 aaKnown RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 MPHOSPH6Q99547 160 aaKnown RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 FDXACB1Q9BRP7 624 aaPredicted RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 SYNCQ9H7C4 482 aa22.51■■□□□ 1.19
CCDC38-201ENST00000344280 ADARB2Q9NS39 739 aaKnown RBP22.51■■□□□ 1.19
CCDC38-201ENST00000344280 PIK3R2O00459 728 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 PIAS1O75925 651 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 MICAL2O94851 1124 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 STX2P32856 288 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 NRLP54845 237 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 PDIA2Q13087 525 aaKnown RBP22.5■■□□□ 1.19
CCDC38-201ENST00000344280 RAB6CQ53S08 254 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 CGB2Q6NT52 195 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 DPH6Q7L8W6 267 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 ANKMY2Q8IV38 441 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 RAB6CQ9H0N0 254 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 VPS37BQ9H9H4 285 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 USP15Q9Y4E8 981 aaPredicted RBP22.5■■□□□ 1.19
CCDC38-201ENST00000344280 MED7O43513 233 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 CILPO75339 1184 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 IL18RAPO95256 599 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 FOXN2P32314 431 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 WDR4P57081 412 aaKnown RBP22.5■■□□□ 1.19
CCDC38-201ENST00000344280 SH3PXD2AQ5TCZ1 1133 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 TRABD2AQ86V40 505 aa22.5■■□□□ 1.19
CCDC38-201ENST00000344280 FARP1Q9Y4F1 1045 aaPredicted RBP22.5■■□□□ 1.19
CCDC38-201ENST00000344280 SPDYE5A6NIY4 337 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 CXCL11O14625 94 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 ALOX15BO15296 676 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 VTNP04004 478 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 SLC26A2P50443 739 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 PKN2Q16513 984 aaKnown RBP22.49■■□□□ 1.19
CCDC38-201ENST00000344280 MSS51Q4VC12 460 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
CCDC38-201ENST00000344280 PDZD7Q9H5P4 517 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 AGAP1Q9UPQ3 857 aa22.49■■□□□ 1.19
CCDC38-201ENST00000344280 MIPP30301 263 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 CTCFP49711 727 aaPredicted RBP22.48■■□□□ 1.19
CCDC38-201ENST00000344280 XRCC4Q13426 336 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 SLC10A6Q3KNW5 377 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 CYB5D1Q6P9G0 228 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 UBA3Q8TBC4 463 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 FNIP1Q8TF40 1166 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 CPT1BQ92523 772 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 TMEM176AQ96HP8 235 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 NKIRAS1Q9NYS0 192 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 ERAP1Q9NZ08 941 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 SHOC2Q9UQ13 582 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 ACTL7BQ9Y614 415 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 TCRBV7S3A2A0A539 114 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 M0QYV0 167 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 DNAJC8O75937 253 aaPredicted RBP22.48■■□□□ 1.19
CCDC38-201ENST00000344280 KRT7P08729 469 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 MNAT1P51948 309 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 GPX6P59796 221 aa22.48■■□□□ 1.19
CCDC38-201ENST00000344280 MYO1EQ12965 1108 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms