RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ELOVL4Q9GZR5 314 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 NSRP1Q9H0G5 558 aaKnown RBP15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 ERAP1Q9NZ08 941 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 MED7O43513 233 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 GDF10P55107 478 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 SLC25A11Q02978 314 aaKnown RBP15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 GAD2Q05329 585 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 PIGWQ7Z7B1 504 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 ANKMY2Q8IV38 441 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 ACTL9Q8TC94 416 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 CCDC134Q9H6E4 229 aa15.67■□□□□ 0.1
VIPAS39-202ENST00000343765 C3orf70A6NLC5 250 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 CCT8L1PA6NM43 557 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 SIGLEC16A6NMB1 481 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 RASA4BC9J798 803 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 RASA4O43374 803 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 PIAS1O75925 651 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 MICAL2O94851 1124 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 IL18RAPO95256 599 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 OSBPP22059 807 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 PHKA2P46019 1235 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 COPS2P61201 443 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 PTPN11Q06124 597 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 STAT4Q14765 748 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 ARMCX2Q7L311 632 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 XYLT1Q86Y38 959 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 NIPA2Q8N8Q9 360 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 CCHCR1Q8TD31 782 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 PRMT7Q9NVM4 692 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 HAUS2Q9NVX0 235 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 SPAG7O75391 227 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 STX2P32856 288 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 HEXIM2Q96MH2 286 aaKnown RBP15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 CFAP57Q96MR6 1250 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 BCO2Q9BYV7 579 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 ACTR5Q9H9F9 607 aaPredicted RBP15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 MGAMO43451 1857 aa15.66■□□□□ 0.1
VIPAS39-202ENST00000343765 HGSO14964 777 aaPredicted RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 LGALS2P05162 132 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 SLC26A2P50443 739 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 NRLP54845 237 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 PDIA2Q13087 525 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 MOGSQ13724 837 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 FAM133BQ5BKY9 247 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 DRICH1Q6PGQ1 229 aaPredicted RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 RFX6Q8HWS3 928 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 CALN1Q9BXU9 219 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 PDZD7Q9H5P4 517 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 SLC40A1Q9NP59 571 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 AGAP1Q9UPQ3 857 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 TCEA3O75764 348 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 ARHGAP1Q07960 439 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 HADHQ16836 314 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 FAM102AQ5T9C2 384 aaPredicted RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 RNASEH2BQ5TBB1 312 aaKnown RBP15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 KCTD6Q8NC69 237 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 NLRP7Q8WX94 980 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 TMEM176AQ96HP8 235 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 LHX5Q9H2C1 402 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 ABCF3Q9NUQ8 709 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 NKIRAS1Q9NYS0 192 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 LGALS13Q9UHV8 139 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 GINS2Q9Y248 185 aa15.65■□□□□ 0.1
VIPAS39-202ENST00000343765 GRAP2O75791 330 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 ARF4P18085 180 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 PPIL2Q13356 520 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 RAB6CQ53S08 254 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 SH3PXD2AQ5TCZ1 1133 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 ANKRD22Q5VYY1 191 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 AFG1LQ8WV93 481 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 NKD2Q969F2 451 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 HPDLQ96IR7 371 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 TGS1Q96RS0 853 aaKnown RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 RAB6CQ9H0N0 254 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 KCNH4Q9UQ05 1017 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 DRG1Q9Y295 367 aaKnown RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 SNX3O60493 162 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 CILPO75339 1184 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 ITGAVP06756 1048 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 KRT7P08729 469 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 KDELR1P24390 212 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 MIPP30301 263 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 MORF4L2Q15014 288 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 AMHR2Q16671 573 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 CDO1Q16878 200 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 SLC10A6Q3KNW5 377 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 SYCP2LQ5T4T6 812 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 MAP1SQ66K74 1059 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 RELL1Q8IUW5 271 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 SLC35B2Q8TB61 432 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 PCDH9Q9HC56 1237 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 GCAP28676 217 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 PTPN7P35236 360 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 MYO1EQ12965 1108 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 MMRN1Q13201 1228 aa15.64■□□□□ 0.09
VIPAS39-202ENST00000343765 ITIH4Q14624 930 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms