RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 FAM172AQ8WUF8 416 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 SPATC1LQ9H0A9 340 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 NOD2Q9HC29 1040 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDH5-201ENST00000341529 CPSF2Q9P2I0 782 aaKnown RBP12.5□□□□□ -0.41
CDH5-201ENST00000341529 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 COG5Q9UP83 839 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 CHD2O14647 1828 aaKnown RBP12.5□□□□□ -0.41
CDH5-201ENST00000341529 CCL15-CCL14A0A0B4J2E2 113 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 ASB14A6NK59 587 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 DSG3P32926 999 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 TPI1P60174 286 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 CHI3L2Q15782 390 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 CCL15Q16663 113 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 C15orf59Q2T9L4 293 aaPredicted RBP12.5□□□□□ -0.41
CDH5-201ENST00000341529 DENND5BQ6ZUT9 1274 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 CDC26Q8NHZ8 85 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 BSNDQ8WZ55 320 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 SPDL1Q96EA4 605 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 DPP3Q9NY33 737 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 NINJ2Q9NZG7 142 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 PCDHA3Q9Y5H8 950 aa12.5□□□□□ -0.41
CDH5-201ENST00000341529 AGPSO00116 658 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 SKIP12755 728 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 RFC1P35251 1148 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 AP3M2P53677 418 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 COG7P83436 770 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 PTPN11Q06124 597 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 NFIL3Q16649 462 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 IQCKQ8N0W5 287 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 BHMTQ93088 406 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 ZNF669Q96BR6 464 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 SERPINB12Q96P63 405 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 KIF9Q9HAQ2 790 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 HEY2Q9UBP5 337 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 MYH10P35580 1976 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 B4GALT5O43286 388 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 TAS2R40P59535 323 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 NSUN2Q08J23 767 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDH5-201ENST00000341529 CDKL3Q8IVW4 592 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 CHST13Q8NET6 341 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 PABPC5Q96DU9 382 aaKnown RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 PAFAH2Q99487 392 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 ROPN1BQ9BZX4 212 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 ROPN1Q9HAT0 212 aaPredicted RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 GH1P01241 217 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 PTPRAP18433 802 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 GLRA2P23416 452 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 HUNKP57058 714 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 CUL3Q13618 768 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 TDRD10Q5VZ19 366 aaKnown RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 ALKBH8Q96BT7 664 aaKnown RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 RSAD1Q9HA92 442 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 ANLNQ9NQW6 1124 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 R3HDM2Q9Y2K5 976 aaKnown RBP12.49□□□□□ -0.41
CDH5-201ENST00000341529 RGPD5Q99666 1765 aa12.49□□□□□ -0.41
CDH5-201ENST00000341529 M0R2N6 131 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 OPLAHO14841 1288 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 CLGNO14967 610 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 RGL2O15211 777 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 USP12O75317 370 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 CELF2O95319 508 aaKnown RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 GNL1P36915 607 aaPredicted RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 TAP1Q03518 808 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 DEUP1Q05D60 604 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 TAF1BQ53T94 588 aaPredicted RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 MPZL3Q6UWV2 235 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 ZNF677Q86XU0 584 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 PPIL6Q8IXY8 311 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 WDR35Q9P2L0 1181 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 PRG3Q9Y2Y8 225 aaPredicted RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 SLC4A7Q9Y6M7 1214 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 KCNK1O00180 336 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 NCAM1P13591 858 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 UBA1P22314 1058 aaKnown RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 NDST1P52848 882 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 CENPCQ03188 943 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 STX3Q13277 289 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 TMEM132BQ14DG7 1078 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 QPCTQ16769 361 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 NPNTQ6UXI9 565 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 SYDE1Q6ZW31 735 aaPredicted RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 BZW1Q7L1Q6 419 aaKnown RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 PRCCQ92733 491 aaPredicted RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 SLCO1B3Q9NPD5 702 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 ADA2Q9NZK5 511 aa12.48□□□□□ -0.41
CDH5-201ENST00000341529 SMG5Q9UPR3 1016 aaKnown RBP12.48□□□□□ -0.41
CDH5-201ENST00000341529 UMODL1Q5DID0 1318 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms