RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CBX2Q14781 532 aaPredicted RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 FXNQ16595 210 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 KNOP1Q1ED39 458 aaKnown RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 EFCAB13Q8IY85 973 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 GPD1LQ8N335 351 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SMRP1Q8NCR6 262 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 FBXO27Q8NI29 283 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SPATA20Q8TB22 786 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 CASP10Q92851 521 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SAAL1Q96ER3 474 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 TTPALQ9BTX7 342 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 EMILIN2Q9BXX0 1053 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 FBXO9Q9UK97 447 aaPredicted RBP11.08□□□□□ -0.64
TPM3-207ENST00000341372 INTUQ9ULD6 942 aa11.08□□□□□ -0.64
TPM3-207ENST00000341372 SCN1AP35498 2009 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 ANO9A1A5B4 782 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 H3BQ06 376 aaPredicted RBP11.07□□□□□ -0.64
TPM3-207ENST00000341372 SYN3O14994 580 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 TEX28O15482 410 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 TRAPPC3O43617 180 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 LIG3P49916 1009 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 CLCN4P51793 760 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
TPM3-207ENST00000341372 SPAG1Q07617 926 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 FAM171A1Q5VUB5 890 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 FBXW10Q5XX13 1052 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 ANKRD54Q6NXT1 300 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 PDXDC1Q6P996 788 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 NELFCDQ8IXH7 590 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 BEST2Q8NFU1 509 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 LNX1Q8TBB1 728 aaPredicted RBP11.07□□□□□ -0.64
TPM3-207ENST00000341372 SUSD3Q96L08 255 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 B3GALT6Q96L58 329 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 KCTD10Q9H3F6 313 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 KIAA1586Q9HCI6 787 aa11.07□□□□□ -0.64
TPM3-207ENST00000341372 RBAKQ9NYW8 714 aaPredicted RBP11.07□□□□□ -0.64
TPM3-207ENST00000341372 TCF20Q9UGU0 1960 aaKnown RBP11.06□□□□□ -0.64
TPM3-207ENST00000341372 PAPLNO95428 1278 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 ADH1AP07327 375 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 HOXB8P17481 243 aaPredicted RBP11.06□□□□□ -0.64
TPM3-207ENST00000341372 BRCC3P46736 316 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 KIAA1841Q6NSI8 718 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 SYCE2Q6PIF2 218 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 CHPFQ8IZ52 775 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 GOLGA5Q8TBA6 731 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 RIN2Q8WYP3 895 aaPredicted RBP11.06□□□□□ -0.64
TPM3-207ENST00000341372 CCDC47Q96A33 483 aaKnown RBP11.06□□□□□ -0.64
TPM3-207ENST00000341372 S1PR5Q9H228 398 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 DZANK1Q9NVP4 752 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 MTRRQ9UBK8 725 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 VCANP13611 3396 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 M0QZQ0 153 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 C2CD2LO14523 706 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 MBTPS2O43462 519 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 EPCAMP16422 314 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 FSHRP23945 695 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 CA8P35219 290 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 C9orf57Q5W0N0 161 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 CBWD2Q8IUF1 395 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 TMEM130Q8N3G9 435 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 GUF1Q8N442 669 aaKnown RBP11.06□□□□□ -0.64
TPM3-207ENST00000341372 SUSD6Q92537 303 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 PCIF1Q9H4Z3 704 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 TSR3Q9UJK0 312 aaKnown RBP11.06□□□□□ -0.64
TPM3-207ENST00000341372 BACE2Q9Y5Z0 518 aa11.06□□□□□ -0.64
TPM3-207ENST00000341372 DENND4AQ7Z401 1863 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 GOLGA8IPA6NC78 632 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 GOLGA8JA6NMD2 632 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 PIRO00625 290 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 PDXKO00764 312 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 NRDCO43847 1150 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 TKTP29401 623 aaKnown RBP11.05□□□□□ -0.64
TPM3-207ENST00000341372 PNOCQ13519 176 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 MYBPC2Q14324 1141 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 SMAD2Q15796 467 aaKnown RBP11.05□□□□□ -0.64
TPM3-207ENST00000341372 PSMD5Q16401 504 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 NFIL3Q16649 462 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 COBLL1Q53SF7 1204 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 PERM1Q5SV97 790 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 LLGL2Q6P1M3 1020 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 PRSS55Q6UWB4 352 aaPredicted RBP11.05□□□□□ -0.64
TPM3-207ENST00000341372 EP400NLQ6ZTU2 488 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 AFAP1L2Q8N4X5 818 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 XXYLT1Q8NBI6 393 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 SVIPQ8NHG7 77 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 CXorf38Q8TB03 319 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 HDAC7Q8WUI4 952 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 GSDMAQ96QA5 445 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 CLSTN3Q9BQT9 956 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 ZNF700Q9H0M5 742 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 DMAC2Q9NW81 257 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 FAM50BQ9Y247 325 aa11.05□□□□□ -0.64
TPM3-207ENST00000341372 ZNF233A6NK53 670 aa11.04□□□□□ -0.64
TPM3-207ENST00000341372 PPEF2O14830 753 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms