RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SLC8A1P32418 973 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 OTUD4Q01804 1114 aaKnown RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 PDIA2Q13087 525 aaKnown RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 RIPK1Q13546 671 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 TAZQ16635 292 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 HIF1AQ16665 826 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 HADHQ16836 314 aaKnown RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 HP1BP3Q5SSJ5 553 aaPredicted RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 BBS12Q6ZW61 710 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 TBC1D1Q86TI0 1168 aaPredicted RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 CEP120Q8N960 986 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 JOSD2Q8TAC2 188 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 ACTL9Q8TC94 416 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 RMDN2Q96LZ7 410 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 PITPNM3Q9BZ71 974 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 FZD8Q9H461 694 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 TJP2Q9UDY2 1190 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 POLIQ9UNA4 740 aa15.3■□□□□ 0.04
TDP2-201ENST00000341060 SMG5Q9UPR3 1016 aaKnown RBP15.3■□□□□ 0.04
TDP2-201ENST00000341060 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 CD19P15391 556 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 MGAT5Q09328 741 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 PKN2Q16513 984 aaKnown RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 WLSQ5T9L3 541 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 DPY19L2Q6NUT2 758 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 DLK2Q6UY11 383 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 RGS9BPQ6ZS82 235 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 CCDC91Q7Z6B0 441 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 KIAA0319LQ8IZA0 1049 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 FAXDC2Q96IV6 333 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 SMC6Q96SB8 1091 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 ZWILCHQ9H900 591 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 KIF9Q9HAQ2 790 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 WDR35Q9P2L0 1181 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 PSMC3IPQ9P2W1 217 aaPredicted RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 FETUBQ9UGM5 382 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 B4GALT5O43286 388 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 CST8O60676 142 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 SPAG7O75391 227 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 IL18RAPO95256 599 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 KRT15P19012 456 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 KDELR1P24390 212 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 RAP1GAPP47736 663 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 CTCFP49711 727 aaPredicted RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 RAD23BP54727 409 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 GDF10P55107 478 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 OSTNP61366 133 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 CCDC15Q0P6D6 951 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 TFDP1Q14186 410 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 SPARCL1Q14515 664 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 ZNF268Q14587 947 aaPredicted RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 PREPLQ4J6C6 727 aaPredicted RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 EFHC2Q5JST6 749 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 KCNT1Q5JUK3 1230 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 CELF3Q5SZQ8 465 aaKnown RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 XYLT1Q86Y38 959 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 PPIL6Q8IXY8 311 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 CPXM1Q96SM3 734 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 MPHOSPH6Q99547 160 aaKnown RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 SAE1Q9UBE0 346 aaPredicted RBP15.29■□□□□ 0.04
TDP2-201ENST00000341060 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 STARD13Q9Y3M8 1113 aa15.29■□□□□ 0.04
TDP2-201ENST00000341060 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 ITGBL1O95965 494 aaPredicted RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 KRT19P08727 400 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 CXCL8P10145 99 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 NQO1P15559 274 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 PSMC4P43686 418 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 GPX6P59796 221 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 PSMC1P62191 440 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 DYNLT1P63172 113 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 CAPN12Q6ZSI9 719 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 CPT1BQ92523 772 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 NLRP4Q96MN2 994 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 INO80BQ9C086 356 aaPredicted RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 ADARB2Q9NS39 739 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 TRIP11Q15643 1979 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 PLXNA1Q9UIW2 1896 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 CLUHO75153 1309 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 SOCS7O14512 581 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 TYROBPO43914 113 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 SKIV2L2P42285 1042 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 SLC26A2P50443 739 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 GEMIN4P57678 1058 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 KCNJ2P63252 427 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 MBTD1Q05BQ5 628 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 PDK4Q16654 411 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 EEF1DP3Q658K8 133 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 ECHDC2Q86YB7 292 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 NAT8LQ8N9F0 302 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
TDP2-201ENST00000341060 CDT1Q9H211 546 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 YY1AP1Q9H869 796 aa15.28■□□□□ 0.04
TDP2-201ENST00000341060 RPF1Q9H9Y2 349 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms