RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 LEMD2Q8NC56 503 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 ZNF461Q8TAF7 563 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 ZNF512Q96ME7 567 aaPredicted RBP12.4□□□□□ -0.42
ATXN3-201ENST00000340660 MXRA8Q9BRK3 442 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 EIF2AQ9BY44 585 aaKnown RBP12.4□□□□□ -0.42
ATXN3-201ENST00000340660 LRRC3Q9BY71 257 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 KRTAP4-6Q9BYQ5 205 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 INO80BQ9C086 356 aaPredicted RBP12.4□□□□□ -0.42
ATXN3-201ENST00000340660 ZDHHC5Q9C0B5 715 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 GAREM1Q9H706 876 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 CYP4F11Q9HBI6 524 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 MMP17Q9ULZ9 603 aa12.4□□□□□ -0.42
ATXN3-201ENST00000340660 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
ATXN3-201ENST00000340660 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 ESYT2A0FGR8 921 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 EPXP11678 715 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 ARSAP15289 507 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 CD33P20138 364 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 IGFBP6P24592 240 aaPredicted RBP12.39□□□□□ -0.43
ATXN3-201ENST00000340660 ELF1P32519 619 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 KIF5BP33176 963 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 CLDN10P78369 228 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 TEAD4Q15561 434 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.39□□□□□ -0.43
ATXN3-201ENST00000340660 MKL2Q9ULH7 1088 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 BACE2Q9Y5Z0 518 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 AKAP9Q99996 3911 aa12.39□□□□□ -0.43
ATXN3-201ENST00000340660 CASTOR2A6NHX0 329 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 KLK10O43240 276 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 ALDH1A2O94788 518 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 PRKCBP05771 671 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 FAM157BP0CG42 384 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 ATF2P15336 505 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 SEC13P55735 322 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 BNC1Q01954 994 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 TWF1Q12792 350 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 GRIK3Q13003 919 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 ALX1Q15699 326 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 TBCELQ5QJ74 424 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 ZNF410Q86VK4 478 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
ATXN3-201ENST00000340660 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 KSR1Q8IVT5 923 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 ELMOD1Q8N336 334 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 TRIML1Q8N9V2 468 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 GPRC5CQ9NQ84 441 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
ATXN3-201ENST00000340660 NUP210Q8TEM1 1887 aaPredicted RBP12.38□□□□□ -0.43
ATXN3-201ENST00000340660 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
ATXN3-201ENST00000340660 FGAP02671 866 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 GJA4P35212 333 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 NOS2P35228 1153 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 CDC42EP1Q00587 391 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 BYSLQ13895 437 aaKnown RBP12.37□□□□□ -0.43
ATXN3-201ENST00000340660 SAMD5Q5TGI4 173 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 HES3Q5TGS1 186 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 DHX40Q8IX18 779 aaKnown RBP12.37□□□□□ -0.43
ATXN3-201ENST00000340660 HMGB4Q8WW32 186 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 ESR2Q92731 530 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 FRAT1Q92837 279 aaPredicted RBP12.37□□□□□ -0.43
ATXN3-201ENST00000340660 EPN3Q9H201 632 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 IFT122Q9HBG6 1241 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 BCCIPQ9P287 314 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATXN3-201ENST00000340660 TPCN1Q9ULQ1 816 aa12.37□□□□□ -0.43
ATXN3-201ENST00000340660 EML1O00423 815 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 DHX15O43143 795 aaKnown RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 ATP9BO43861 1147 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 TKTP29401 623 aaKnown RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 SREBF1P36956 1147 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 ELAVL2Q12926 359 aaKnown RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 UBE2SQ16763 222 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 SLC8B1Q6J4K2 584 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 LINC00114Q6XXX2 140 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 RHPN2Q8IUC4 686 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 TPCN2Q8NHX9 752 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 KCNE4Q8WWG9 221 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 CD101Q93033 1021 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 NLRP4Q96MN2 994 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 SMG9Q9H0W8 520 aaKnown RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 FAM124BQ9H5Z6 455 aaPredicted RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 MRS2Q9HD23 443 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 ECHDC1Q9NTX5 307 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 THG1LQ9NWX6 298 aaKnown RBP12.36□□□□□ -0.43
ATXN3-201ENST00000340660 SUSD2Q9UGT4 822 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 GIT1Q9Y2X7 761 aa12.36□□□□□ -0.43
ATXN3-201ENST00000340660 MYLKQ15746 1914 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 K7EQS6 105 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 EFSO43281 561 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 CER1O95813 267 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 AKAP5P24588 427 aa12.35□□□□□ -0.43
ATXN3-201ENST00000340660 MAOBP27338 520 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms