RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 UBE4BO95155 1302 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 CLPTM1O96005 669 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 FAM86B2P0C5J1 330 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 ARSEP51690 589 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 EIF6P56537 245 aaKnown RBP9.85□□□□□ -0.83
NECAP1-201ENST00000339754 TAS2R40P59535 323 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 CETN1Q12798 172 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 CCNIQ14094 377 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 TLR1Q15399 786 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 EFHC1Q5JVL4 640 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 SLC10A5Q5PT55 438 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 KLHL35Q6PF15 583 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 FAM196AQ6ZSG2 479 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 CENPUQ71F23 418 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 PRPF39Q86UA1 669 aaKnown RBP9.85□□□□□ -0.83
NECAP1-201ENST00000339754 CLEC10AQ8IUN9 316 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 OGFOD1Q8N543 542 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 RIN3Q8TB24 985 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 PLEKHO2Q8TD55 490 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 BTBD9Q96Q07 612 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 CDK5RAP2Q96SN8 1893 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 STRA6Q9BX79 667 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 RTFDC1Q9BY42 306 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-201ENST00000339754 SENP6Q9GZR1 1112 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-201ENST00000339754 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 ANKRD2Q9GZV1 360 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 TRPC5Q9UL62 973 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-201ENST00000339754 LZTS1Q9Y250 596 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 SSX2IPQ9Y2D8 614 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 WDR37Q9Y2I8 494 aa9.85□□□□□ -0.83
NECAP1-201ENST00000339754 MEIS2O14770 477 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 DENRO43583 198 aaKnown RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 LPXNO60711 386 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 ZNF189O75820 626 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 FUT4P22083 530 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 SLC5A2P31639 672 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 CD97P48960 835 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 RPS8P62241 208 aaKnown RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 GSTO1P78417 241 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 SNAPC2Q13487 334 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 LLGL2Q6P1M3 1020 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TMC7Q7Z402 723 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 FAM178BQ8IXR5 827 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 RNF168Q8IYW5 571 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 MARVELD2Q8N4S9 558 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 ALLCQ8N6M5 410 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TTC17Q96AE7 1141 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 SERAC1Q96JX3 654 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 FAM111AQ96PZ2 611 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 HSD17B14Q9BPX1 270 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TMEM117Q9H0C3 514 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 PCIF1Q9H4Z3 704 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 QTRT2Q9H974 415 aaKnown RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 INIPQ9NRY2 104 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 UBAP1Q9NZ09 502 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 PCDHGB4Q9UN71 923 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 PCDHGB5Q9Y5G0 923 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 STK24Q9Y6E0 443 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 IGKV6D-41A0A0C4DH26 115 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 PRR5-ARHGAP8B1AHC4 643 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 NDC80O14777 642 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 CASQ2O14958 399 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 MSH4O15457 936 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 PEX1O43933 1283 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 CD48P09326 243 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 GLRA2P23416 452 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 SERPINB8P50452 374 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 ARHGAP8P85298 464 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 GAD2Q05329 585 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 SLC18A2Q05940 514 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 MTMR2Q13614 643 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 BTG3Q14201 252 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 MYBPC2Q14324 1141 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 MSS51Q4VC12 460 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 CES4AQ5XG92 561 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TPTE2Q6XPS3 522 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 C3orf62Q6ZUJ4 267 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 KATNAL2Q8IYT4 538 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 MCOLN2Q8IZK6 566 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 NUP93Q8N1F7 819 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 FAM20AQ96MK3 541 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 WDR83Q9BRX9 315 aaKnown RBP9.84□□□□□ -0.83
NECAP1-201ENST00000339754 ACSS3Q9H6R3 686 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 SEL1LQ9UBV2 794 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 ZNF148Q9UQR1 794 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 EP400Q96L91 3159 aa9.84□□□□□ -0.83
NECAP1-201ENST00000339754 TISP43B9A030 160 aa9.83□□□□□ -0.84
NECAP1-201ENST00000339754 TXNDC9O14530 226 aa9.83□□□□□ -0.84
NECAP1-201ENST00000339754 CCNT2O60583 730 aaKnown RBP9.83□□□□□ -0.84
NECAP1-201ENST00000339754 SORBS2O94875 1100 aaKnown RBP9.83□□□□□ -0.84
NECAP1-201ENST00000339754 PROSCO94903 275 aa9.83□□□□□ -0.84
NECAP1-201ENST00000339754 CALCAP01258 141 aa9.83□□□□□ -0.84
NECAP1-201ENST00000339754 MT-ND3P03897 115 aa9.83□□□□□ -0.84
NECAP1-201ENST00000339754 VIL1P09327 827 aaKnown RBP9.83□□□□□ -0.84
NECAP1-201ENST00000339754 UNGP13051 313 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms