RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 DNAJC9Q8WXX5 260 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 FAM167AQ96KS9 214 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 PHTF1Q9UMS5 762 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 RPL26L1Q9UNX3 145 aaKnown RBP19.77■□□□□ 0.76
PSPC1-201ENST00000338910 ZBTB42B2RXF5 422 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 ZC3H11AO75152 810 aaKnown RBP eCLIP19.77■□□□□ 0.76
PSPC1-201ENST00000338910 CAV1Q03135 178 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 LAMTOR4Q0VGL1 99 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 DNAJC3Q13217 504 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 SNX1Q13596 522 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 TSNAXIP1Q2TAA8 658 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 SCARA3Q6AZY7 606 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 RNF149Q8NC42 400 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 TTC8Q8TAM2 541 aa19.77■□□□□ 0.76
PSPC1-201ENST00000338910 ZNF564Q8TBZ8 553 aaPredicted RBP19.77■□□□□ 0.76
PSPC1-201ENST00000338910 GTF3C2Q8WUA4 911 aaPredicted RBP19.77■□□□□ 0.76
PSPC1-201ENST00000338910 DENND2DQ9H6A0 471 aaPredicted RBP19.77■□□□□ 0.76
PSPC1-201ENST00000338910 ASB14A6NK59 587 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 DCTN3O75935 186 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 GJB1P08034 283 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 LLGL1Q15334 1064 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 IER5Q5VY09 327 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 SYDE1Q6ZW31 735 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-201ENST00000338910 ENOSF1Q7L5Y1 443 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 GALNT15Q8N3T1 639 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 C2orf69Q8N8R5 385 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 OR5B17Q8NGF7 314 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 SPOCK2Q92563 424 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 KCNN1Q92952 543 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 FAM136AQ96C01 138 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 PWWP2AQ96N64 755 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 NUP85Q9BW27 656 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 CHST7Q9NS84 486 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 ADGRA2Q96PE1 1338 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 RASA4BC9J798 803 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 H0Y3Z8 333 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 RASA4O43374 803 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 ENTPD5O75356 428 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 TNFSF9P41273 254 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 FKBP1BP68106 108 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 GJC2Q5T442 439 aaPredicted RBP19.76■□□□□ 0.75
PSPC1-201ENST00000338910 RGS9BPQ6ZS82 235 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 MAML1Q92585 1016 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 ZNF653Q96CK0 615 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 TRAIPQ9BWF2 469 aa19.76■□□□□ 0.75
PSPC1-201ENST00000338910 MSCO60682 206 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 LGR5O75473 907 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 SP100P23497 879 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-201ENST00000338910 TTLL4Q14679 1199 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 STAT4Q14765 748 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 TMEM154Q6P9G4 183 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 PLPPR4Q7Z2D5 763 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 APBB1IPQ7Z5R6 666 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-201ENST00000338910 RHPN2Q8IUC4 686 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 RBBP8NLQ8NC74 664 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-201ENST00000338910 PTPN18Q99952 460 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 PAIP2Q9BPZ3 127 aaKnown RBP19.75■□□□□ 0.75
PSPC1-201ENST00000338910 TLE6Q9H808 572 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 PIDD1Q9HB75 910 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 APOBEC3GQ9HC16 384 aaKnown RBP19.75■□□□□ 0.75
PSPC1-201ENST00000338910 SLCO1B3Q9NPD5 702 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 SLC45A1Q9Y2W3 748 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 CNTNAP2Q9UHC6 1331 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 CYP1A2P05177 515 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 ALDH3A1P30838 453 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 RASSF2P50749 326 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 TRIP13Q15645 432 aaPredicted RBP19.75■□□□□ 0.75
PSPC1-201ENST00000338910 NBPF20Q3BBV1 942 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 ZNF792Q3KQV3 632 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 SPRYD7Q5W111 196 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 ZNF449Q6P9G9 518 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 ANKRD23Q86SG2 305 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 DENND1AQ8TEH3 1009 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 ZFAND2BQ8WV99 257 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 DCLRE1BQ9H816 532 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 ANAPC5Q9UJX4 755 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 MROH7Q68CQ1 1323 aa19.75■□□□□ 0.75
PSPC1-201ENST00000338910 CBX6O95503 412 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 GCLCP48506 637 aaPredicted RBP19.74■□□□□ 0.75
PSPC1-201ENST00000338910 EFNA5P52803 228 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 SPDYAQ5MJ70 313 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 ACAD10Q6JQN1 1059 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 C10orf82Q8WW14 230 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 ATG4AQ8WYN0 398 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 ATF2P15336 505 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 RPS6KA3P51812 740 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 MXD4Q14582 209 aaPredicted RBP19.74■□□□□ 0.75
PSPC1-201ENST00000338910 RELL1Q8IUW5 271 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 CPA5Q8WXQ8 436 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 ZNF333Q96JL9 665 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 CGRRF1Q99675 332 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 CCDC77Q9BR77 488 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 MRPL4Q9BYD3 311 aaKnown RBP19.74■□□□□ 0.75
PSPC1-201ENST00000338910 C2CD2Q9Y426 696 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 IVNS1ABPQ9Y6Y0 642 aa19.74■□□□□ 0.75
PSPC1-201ENST00000338910 SIGLEC16A6NMB1 481 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 EDF1O60869 148 aaKnown RBP19.73■□□□□ 0.75
PSPC1-201ENST00000338910 RTN3O95197 1032 aaPredicted RBP19.73■□□□□ 0.75
PSPC1-201ENST00000338910 GAS8O95995 478 aa19.73■□□□□ 0.75
PSPC1-201ENST00000338910 MYBL1P10243 752 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms