RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OVOS1Q6IE37 1185 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PLEKHA7Q6IQ23 1121 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SLFN11Q7Z7L1 901 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SYCE1Q8N0S2 351 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ANKRD52Q8NB46 1076 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SPATA18Q8TC71 538 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 C18orf8Q96DM3 657 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CALR3Q96L12 384 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 COLEC11Q9BWP8 271 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TLR10Q9BXR5 811 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SYNCQ9H7C4 482 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ST7Q9NRC1 585 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CDH9Q9ULB4 789 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 HYOU1Q9Y4L1 999 aa15.6■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MYBPHLA2RUH7 354 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 CLDN5O00501 218 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TRAPPC3O43617 180 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 GJB6O95452 261 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ERBB2P04626 1255 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 GALTP07902 379 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TYMPP19971 482 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PBX3P40426 434 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 RGS7P49802 495 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 BCAR1P56945 870 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PDE4CQ08493 712 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MAMLD1Q13495 774 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MESDQ14696 234 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 OTOP2Q7RTS6 562 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PEX26Q7Z412 305 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 FUKQ8N0W3 1084 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MSANTD4Q8NCY6 345 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 UBE2Q2Q8WVN8 375 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 BADQ92934 168 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 HNRNPABQ99729 332 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TMEM175Q9BSA9 504 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 L2HGDHQ9H9P8 463 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MRPL47Q9HD33 250 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PARVAQ9NVD7 372 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MARCH5Q9NX47 278 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ANAPC7Q9UJX3 599 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ADAM28Q9UKQ2 775 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MRFAP1Q9Y605 127 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SCINQ9Y6U3 715 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 VWA8A3KMH1 1905 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PIK3R2O00459 728 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 EFCAB14O75071 495 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 DNA2P51530 1060 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 BCAT1P54687 386 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 YWHAHQ04917 246 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 BST2Q10589 180 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PMF1Q6P1K2 205 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PAQR9Q6ZVX9 377 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 C16orf59Q7L2K0 433 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 NT5DC3Q86UY8 548 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 C7orf61Q8IZ16 206 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 THEM5Q8N1Q8 247 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SLC35F5Q8WV83 523 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ACBD6Q9BR61 282 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 MED10Q9BTT4 135 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TRIM7Q9C029 511 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 ABCB6Q9NP58 842 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 AMFRQ9UKV5 643 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 STRIP2Q9ULQ0 834 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 SAR1BQ9Y6B6 198 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 COL4A6Q14031 1691 aa15.59■□□□□ 0.09
CDK5RAP3-201ENST00000338399 PTPRSQ13332 1948 aa15.58■□□□□ 0.09
CDK5RAP3-201ENST00000338399 TCRBV5S1A1TA0A578 114 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 GOLGA8SH3BPF8 625 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SRGAP2O75044 1071 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SETSIPP0DME0 302 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 GABRB2P47870 512 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PPIGQ13427 754 aaKnown RBP eCLIP15.58■□□□□ 0.088e-9■■■■□ 23.1
CDK5RAP3-201ENST00000338399 C11orf63Q6NUN7 778 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 DNAJC24Q6P3W2 148 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 XYLT1Q86Y38 959 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MYCBPAPQ8TBZ2 947 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 IPO4Q8TEX9 1081 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PSMB7Q99436 277 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 B3GNT5Q9BYG0 378 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 GPR62Q9BZJ7 368 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CWH43Q9H720 699 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 CDC23Q9UJX2 597 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SNX12Q9UMY4 172 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ALG6Q9Y672 507 aa15.58■□□□□ 0.08
CDK5RAP3-201ENST00000338399 E5RJQ4 531 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 BAIAP3O94812 1187 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 INTS6LQ5JSJ4 861 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FAM171A1Q5VUB5 890 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TMEM173Q86WV6 379 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 C3orf20Q8ND61 904 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 OR10T2Q8NGX3 314 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FEZF2Q8TBJ5 459 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZNF689Q96CS4 500 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 PCED1BQ96HM7 432 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 TMEM209Q96SK2 561 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 SELENOOQ9BVL4 669 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 DUSP16Q9BY84 665 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 ZBBXA8MT70 800 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 MYO1FO00160 1098 aa15.57■□□□□ 0.08
CDK5RAP3-201ENST00000338399 FGBP02675 491 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms