RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 USP2O75604 605 aaPredicted RBP6.59□□□□□ -1.36
PRKDC-202ENST00000338368 LGALS2P05162 132 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 SLC8A1P32418 973 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 CNGA2Q16280 664 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 FBXO47Q5MNV8 452 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 TRABDQ9H4I3 376 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 BTBD7Q9P203 1132 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 A0A0B4J269 797 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 PLPPR4Q7Z2D5 763 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 TMC3Q7Z5M5 1100 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 MSL3Q8N5Y2 521 aaKnown RBP6.59□□□□□ -1.36
PRKDC-202ENST00000338368 TSEN2Q8NCE0 465 aaKnown RBP6.59□□□□□ -1.36
PRKDC-202ENST00000338368 NUDCD1Q96RS6 583 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 PRKAG2Q9UGJ0 569 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 TNFSF13BQ9Y275 285 aa6.59□□□□□ -1.36
PRKDC-202ENST00000338368 ASTE1Q2TB18 679 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 DCAF4L1Q3SXM0 396 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 CEP120Q8N960 986 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 PGBD4Q96DM1 585 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 BARX2Q9UMQ3 279 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 AFG3L2Q9Y4W6 797 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 PFDN6O15212 129 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 ACTL9Q8TC94 416 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 HELQQ8TDG4 1101 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 RXFP2Q8WXD0 754 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TINF2Q9BSI4 451 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 DHX33Q9H6R0 707 aaKnown RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 PDGFCQ9NRA1 345 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 RNF19AQ9NV58 838 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.58□□□□□ -1.362e-6■□□□□ 9.7
PRKDC-202ENST00000338368 FARP2O94887 1054 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 HSPA4LO95757 839 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 CST3P01034 146 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 GJB1P08034 283 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 PCSK1P29120 753 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FAM71DQ8N9W8 422 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 NUMA1Q14980 2115 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FAM47DPA6NHR8 397 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TYK2P29597 1187 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 RCN2Q14257 317 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SNCBQ16143 134 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SPATA2LQ8IUW3 424 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FAM172AQ8WUF8 416 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 IPO11Q9UI26 975 aaKnown RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 LRP6O75581 1613 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 B3GAT3O94766 335 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FAM107AO95990 144 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SETSIPP0DME0 302 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 ICAM3P32942 547 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 EPS8L3Q8TE67 593 aaKnown RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 ACO2Q99798 780 aaKnown RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TRIM62Q9BVG3 475 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 NCAM1P13591 858 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 COPS2P61201 443 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 KIAA0319LQ8IZA0 1049 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 VPS39Q96JC1 886 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC37BQ96QE4 947 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SLC38A7Q9NVC3 462 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 CNTNAP1P78357 1384 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TADA2AO75478 443 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 MX2P20592 715 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 MARCKSL1P49006 195 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TPI1P60174 286 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 C4orf22Q6V702 233 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FAM131BQ86XD5 332 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SEC16BQ96JE7 1060 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 IRS2Q9Y4H2 1338 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 APOEP02649 317 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 CTCFP49711 727 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF410Q86VK4 478 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 AGAP3Q96P47 875 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 GPR20Q99678 358 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SLC13A1Q9BZW2 595 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 COQ4Q9Y3A0 265 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 CYP1A2P05177 515 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FAXCQ5TGI0 409 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TXLNGQ9NUQ3 528 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 N4BP2Q86UW6 1770 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 KPNA7A9QM74 516 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 OR1G1P47890 313 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 SMAD1Q15797 465 aaKnown RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TSNAXIP1Q2TAA8 658 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 TDRD10Q5VZ19 366 aaKnown RBP6.58□□□□□ -1.36
PRKDC-202ENST00000338368 PRELID2Q8N945 189 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 URGCPQ8TCY9 931 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 RAPGEF5Q92565 580 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 WHRNQ9P202 907 aa6.58□□□□□ -1.36
PRKDC-202ENST00000338368 FSCN2O14926 492 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 ASS1P00966 412 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 C4BPAP04003 597 aaKnown RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 PAEPP09466 180 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 NCF2P19878 526 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RFC1P35251 1148 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SLC7A14Q8TBB6 771 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 FBXO41Q8TF61 875 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RRAGCQ9HB90 399 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 COG5Q9UP83 839 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 SOWAHBA6NEL2 793 aa6.57□□□□□ -1.36
PRKDC-202ENST00000338368 DNALI1O14645 258 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-202ENST00000338368 RIPK2O43353 540 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms