RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PCSK7Q16549 785 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 ZDHHC15Q96MV8 337 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 PAFAH2Q99487 392 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 PCDHGB4Q9UN71 923 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.31□□□□□ -0.12
RTN4-202ENST00000337526 DDX3XO00571 662 aaKnown RBP eCLIP14.31□□□□□ -0.122e-35■□□□□ 10.1
RTN4-202ENST00000337526 SUPT3HO75486 399 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 GH1P01241 217 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 KRT33BQ14525 404 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 SHCBP1Q8NEM2 672 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 ACTL9Q8TC94 416 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 CALML6Q8TD86 181 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 FRMD8P1Q9BZ68 369 aaPredicted RBP14.31□□□□□ -0.12
RTN4-202ENST00000337526 DCLRE1BQ9H816 532 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 SLIT1O75093 1534 aa14.31□□□□□ -0.12
RTN4-202ENST00000337526 GNL1P36915 607 aaPredicted RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 CAP2P40123 477 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 DAB2P98082 770 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 LAYNQ6UX15 382 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 SGF29Q96ES7 293 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 ILKAPQ9H0C8 392 aaPredicted RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 MAP2P11137 1827 aaKnown RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 ZNF197O14709 1029 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 NDUFS3O75489 264 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 EPHB2P29323 1055 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 TCF7P36402 384 aaPredicted RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 FLOT2Q14254 428 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 ANGEL2Q5VTE6 544 aaKnown RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 SLC30A10Q6XR72 485 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 MTDHQ86UE4 582 aaKnown RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 CHST13Q8NET6 341 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 TFB1MQ8WVM0 346 aaKnown RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 CYP2C8P10632 490 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 ORC1Q13415 861 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 ZNF518BQ9C0D4 1074 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 INTS13Q9NVM9 706 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 SLC24A2Q9UI40 661 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 ZNF263O14978 683 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 RIPK2O43353 540 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 MYO1DO94832 1006 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 MAP4P27816 1152 aaKnown RBP14.3□□□□□ -0.12
RTN4-202ENST00000337526 SOX11P35716 441 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 RAD51Q06609 339 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 ACCSLQ4AC99 568 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 CLEC4FQ8N1N0 589 aa14.3□□□□□ -0.12
RTN4-202ENST00000337526 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 CYTH3O43739 400 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NNMTP40261 264 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NAMPTP43490 491 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 TTC23LQ6PF05 361 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NT5DC3Q86UY8 548 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 TSEN2Q8NCE0 465 aaKnown RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 MEGF6O75095 1541 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 PDE2AO00408 941 aaPredicted RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 CES2O00748 559 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 TRAPPC3O43617 180 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 GAS2O43903 313 aaKnown RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 PYGMP11217 842 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NCAM1P13591 858 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 TGM2P21980 687 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 SERPINB3P29508 390 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 CYP24A1Q07973 514 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 DCAF4L1Q3SXM0 396 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 FOXR1Q6PIV2 292 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 SPOCD1Q6ZMY3 1216 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 GFM2Q969S9 779 aaKnown RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 EHD4Q9H223 541 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 TMX2Q9Y320 296 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 A0A0U1RQJ8 604 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 MAN1A2O60476 641 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 GLRA3O75311 464 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 PCSK1P29120 753 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NUDT2P50583 147 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 SLC26A11Q86WA9 606 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 C4orf19Q8IY42 314 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 ABT1Q9ULW3 272 aaKnown RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 ATP6V1B1P15313 513 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 RPL21P46778 160 aaKnown RBP14.29□□□□□ -0.12
RTN4-202ENST00000337526 KCNK18Q7Z418 384 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 SLC25A41Q8N5S1 370 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 OR9Q1Q8NGQ5 310 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 TATDN2Q93075 761 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 NAT9Q9BTE0 207 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 RXFP1Q9HBX9 757 aa14.29□□□□□ -0.12
RTN4-202ENST00000337526 FRMPD1Q5SYB0 1578 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 H0Y626 953 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
RTN4-202ENST00000337526 TRIM16O95361 564 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 FDFT1P37268 417 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 IFI35P80217 286 aaPredicted RBP14.28□□□□□ -0.12
RTN4-202ENST00000337526 CLEC16AQ2KHT3 1053 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 TMEM119Q4V9L6 283 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 EMC1Q8N766 993 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 MMTAG2Q9BU76 263 aaKnown RBP14.28□□□□□ -0.12
RTN4-202ENST00000337526 MYOZ2Q9NPC6 264 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 LATS2Q9NRM7 1088 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms