RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.23
HLCS-201ENST00000336648 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 COILP38432 576 aaPredicted RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 ITGA8P53708 1063 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 BTKQ06187 659 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 GALNT4Q8N4A0 578 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 CNDP1Q96KN2 507 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 ADAM30Q9UKF2 790 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 KIF1BO60333 1816 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 RBP3P10745 1247 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 PLOD1Q02809 727 aaPredicted RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 MRNIPQ6NTE8 343 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 NSUN4Q96CB9 384 aaKnown RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 PRRG3Q9BZD7 231 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 RAD51CO43502 376 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 HBP1O60381 514 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 MLNP12872 115 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 HARS2P49590 506 aaKnown RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 ATP6V0D2Q8N8Y2 350 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 CHST13Q8NET6 341 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 ANKS1AQ92625 1134 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 RBM12Q9NTZ6 932 aaKnown RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 PHF20L1A8MW92 1017 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 SERPIND1P05546 499 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 ARMC6Q6NXE6 501 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 WNK4Q96J92 1243 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 CHP1Q99653 195 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 ECSITQ9BQ95 431 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 DBR1Q9UK59 544 aaKnown RBP13.59□□□□□ -0.23
HLCS-201ENST00000336648 SPACA6W5XKT8 324 aa13.59□□□□□ -0.23
HLCS-201ENST00000336648 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 TIMM44O43615 452 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 GARTP22102 1010 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 RPA1P27694 616 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 MTF1Q14872 753 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 INAQ16352 499 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 MDH1BQ5I0G3 518 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 TTC33Q6PID6 262 aaPredicted RBP13.58□□□□□ -0.23
HLCS-201ENST00000336648 HHIPL2Q6UWX4 724 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 OOSP2Q86WS3 158 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 ALG6Q9Y672 507 aa13.58□□□□□ -0.23
HLCS-201ENST00000336648 FOXN1O15353 648 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 IFNA14P01570 189 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 RPLP2P05387 115 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 GPR63Q9BZJ6 419 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 IMPAD1Q9NX62 359 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 CTNNAL1Q9UBT7 734 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 TSR3Q9UJK0 312 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 BIRC5O15392 142 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 CST8O60676 142 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 PGK2P07205 417 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 ITGA9Q13797 1035 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 PTGISQ16647 500 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 KLHDC7AQ5VTJ3 777 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 SDE2Q6IQ49 451 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 TFB1MQ8WVM0 346 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 QKIQ96PU8 341 aaKnown RBP eCLIP13.58□□□□□ -0.24
HLCS-201ENST00000336648 UBE2OQ9C0C9 1292 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 FHOD1Q9Y613 1164 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 GTF2H1P32780 548 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 FOXO4P98177 505 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 KRT77Q7Z794 578 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 ZNF507Q8TCN5 953 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 MS4A14Q96JA4 679 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 SLITRK1Q96PX8 696 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 MBD5Q9P267 1494 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 F8W810 466 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 ZNF185O15231 689 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 ZC3H11AO75152 810 aaKnown RBP eCLIP13.58□□□□□ -0.24
HLCS-201ENST00000336648 NR3C2P08235 984 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 FCGR1AP12314 374 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 RGS7P49802 495 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 RPS6P62753 249 aaKnown RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 DSG1Q02413 1049 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 PDK2Q15119 407 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 CHI3L2Q15782 390 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 KDM7AQ6ZMT4 941 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 CCDC81Q6ZN84 652 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 IFNEQ86WN2 208 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 ANKRD27Q96NW4 1050 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 TRPC7Q9HCX4 862 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 KLHL11Q9NVR0 708 aa13.58□□□□□ -0.24
HLCS-201ENST00000336648 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
HLCS-201ENST00000336648 O00370 1275 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ACOT2P49753 483 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ARMC3Q5W041 872 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 CHMP1BQ7LBR1 199 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 DPF2Q92785 391 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms