RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 CCT7Q99832 543 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 SLC25A13Q9UJS0 675 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 F5H423 210 aaPredicted RBP17.28■□□□□ 0.36
PDZD8-201ENST00000334464 PTGER2P43116 358 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 IYDQ6PHW0 289 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 RIN2Q8WYP3 895 aaPredicted RBP17.28■□□□□ 0.36
PDZD8-201ENST00000334464 USP42Q9H9J4 1324 aaKnown RBP17.28■□□□□ 0.36
PDZD8-201ENST00000334464 DCAF6Q58WW2 860 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 ANKS6Q68DC2 871 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 ZFYVE28Q9HCC9 887 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 VWA5AO00534 786 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 TDP2O95551 362 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 F9P00740 461 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
PDZD8-201ENST00000334464 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■□□□□ 8.3
PDZD8-201ENST00000334464 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 RNF181Q9P0P0 153 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 MYO3AQ8NEV4 1616 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 STAG3L1P0CL83 205 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 KRT20P35900 424 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
PDZD8-201ENST00000334464 LONP2Q86WA8 852 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 VPS26AO75436 327 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 ALOX15P16050 662 aaPredicted RBP17.28■□□□□ 0.36
PDZD8-201ENST00000334464 AMPD2Q01433 879 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 NSL1Q96IY1 281 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 REEP2Q9BRK0 252 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 WWOXQ9NZC7 414 aa17.28■□□□□ 0.36
PDZD8-201ENST00000334464 KRT75O95678 551 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 SKP1P63208 163 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 PRKCEQ02156 737 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 CHMP1BQ7LBR1 199 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 LRRC6Q86X45 466 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 ANKMY2Q8IV38 441 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 HS6ST3Q8IZP7 471 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 DPYDQ12882 1025 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 SIKE1Q9BRV8 207 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 TMEM260Q9NX78 707 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 CHMP2BQ9UQN3 213 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 RNF103O00237 685 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 ZC3H11AO75152 810 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDZD8-201ENST00000334464 FBXO21O94952 628 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 NT5DC4Q86YG4 428 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 ZNF333Q96JL9 665 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDZD8-201ENST00000334464 SYBUQ9NX95 663 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 WHRNQ9P202 907 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 RAD54BQ9Y620 910 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 SLC30A9Q6PML9 568 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 ZNF438Q7Z4V0 828 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 SLC44A5Q8NCS7 719 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 YIPF2Q9BWQ6 316 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 SPASTQ9UBP0 616 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
PDZD8-201ENST00000334464 NFKBIL1Q9UBC1 381 aaPredicted RBP17.27■□□□□ 0.36
PDZD8-201ENST00000334464 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.35
PDZD8-201ENST00000334464 NBPF26B4DH59 902 aa17.27■□□□□ 0.35
PDZD8-201ENST00000334464 GALCP54803 685 aa17.27■□□□□ 0.35
PDZD8-201ENST00000334464 CCDC60Q8IWA6 550 aaPredicted RBP17.27■□□□□ 0.35
PDZD8-201ENST00000334464 SEPT5Q99719 369 aaPredicted RBP17.27■□□□□ 0.35
PDZD8-201ENST00000334464 DPP7Q9UHL4 492 aa17.27■□□□□ 0.35
PDZD8-201ENST00000334464 DRG1Q9Y295 367 aaKnown RBP17.27■□□□□ 0.35
PDZD8-201ENST00000334464 CETPP11597 493 aa17.27■□□□□ 0.35
PDZD8-201ENST00000334464 SEC24DO94855 1032 aaPredicted RBP17.26■□□□□ 0.35
PDZD8-201ENST00000334464 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 ALDH7A1P49419 539 aaKnown RBP17.26■□□□□ 0.35
PDZD8-201ENST00000334464 DNAJC9Q8WXX5 260 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 ERP44Q9BS26 406 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.352e-7■■■■□ 21
PDZD8-201ENST00000334464 ITGA9Q13797 1035 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 TTC33Q6PID6 262 aaPredicted RBP17.26■□□□□ 0.35
PDZD8-201ENST00000334464 GSPT2Q8IYD1 628 aaKnown RBP17.26■□□□□ 0.35
PDZD8-201ENST00000334464 ADSSL1Q8N142 457 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 SLCO1B7G3V0H7 640 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 SOAT1P35610 550 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 FGD2Q7Z6J4 655 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 CPA5Q8WXQ8 436 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 DEPDC7Q96QD5 511 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 TMCC3Q9ULS5 477 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 MAGEA4P43358 317 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 LRRC14Q15048 493 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 DPP10Q8N608 796 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 PRR29P0C7W0 189 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 LSP1P33241 339 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 C1DQ13901 141 aaKnown RBP17.26■□□□□ 0.35
PDZD8-201ENST00000334464 C16orf86Q6ZW13 317 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 TMED10P49755 219 aaKnown RBP17.26■□□□□ 0.35
PDZD8-201ENST00000334464 AGAP3Q96P47 875 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 DNAJC7Q99615 494 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 PHF20Q9BVI0 1012 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 STARD13Q9Y3M8 1113 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 TMEM253P0C7T8 217 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 TRIP10Q15642 601 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 SIRT2Q8IXJ6 389 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 MMGT1Q8N4V1 131 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 TM9SF1O15321 606 aa17.26■□□□□ 0.35
PDZD8-201ENST00000334464 C6orf222P0C671 652 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms