RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 RASA2Q15283 850 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SEL1L3Q68CR1 1132 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 KCNV1Q6PIU1 500 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 STX12Q86Y82 276 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 NUP93Q8N1F7 819 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TNIP3Q96KP6 325 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ECSITQ9BQ95 431 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 EXOSC4Q9NPD3 245 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 DDX20Q9UHI6 824 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 AKT3Q9Y243 479 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 PCDHB6Q9Y5E3 794 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 AK9Q5TCS8 1911 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FRMPD2Q68DX3 1309 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 OVOS2A0A0G2JMS6 1433 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SYNJ2BP-COX16A0A087WUM0 186 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ANXA1P04083 346 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FDX1P10109 184 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 PRKAR1AP10644 381 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ATP6V1B1P15313 513 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ATP6V1C1P21283 382 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ADSLP30566 484 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 PRCPP42785 496 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SARSP49591 514 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TNFAIP8L3Q5GJ75 292 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 EAF2Q96CJ1 260 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TEX13BQ9BXU2 312 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 COX16Q9P0S2 106 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TRMT6Q9UJA5 497 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 CARD8Q9Y2G2 431 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SNX13Q9Y5W8 968 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 RAD51CO43502 376 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 CAND2O75155 1236 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 AP1G2O75843 785 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 IFNGR2P38484 337 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ACTR2P61160 394 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 DPYSQ14117 519 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 KCTD2Q14681 263 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 KIF22Q14807 665 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 DRAP1Q14919 205 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 C6orf10Q5SRN2 563 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SLFN13Q68D06 897 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 CAMK1DQ8IU85 385 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 PGM2Q96G03 612 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 MED15Q96RN5 788 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 KCTD14Q9BQ13 255 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 C6orf203Q9P0P8 240 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FBXO40Q9UH90 709 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TMCC3Q9ULS5 477 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FARP1Q9Y4F1 1045 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ATP10AO60312 1499 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ZNF18P17022 549 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 BTDP43251 543 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 CDK7P50613 346 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 PDK2Q15119 407 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 C16orf62Q7Z3J2 963 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TAB3Q8N5C8 712 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 AMER2Q8N7J2 671 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FLAD1Q8NFF5 587 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TBX3O15119 743 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TEX28O15482 410 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SLC26A3P40879 764 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SNX31Q8N9S9 440 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TMIEQ8NEW7 156 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 BARHL2Q9NY43 387 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 BTBD3Q9Y2F9 522 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ZC3H13Q5T200 1668 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 CCDC154A6NI56 674 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SYNCRIPO60506 623 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FTLP02792 175 aaPredicted RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 UBE3AQ05086 875 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 ENPEPQ07075 957 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 RIPK1Q13546 671 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 GRM4Q14833 912 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 MEI1Q5TIA1 1274 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 CASP12Q6UXS9 341 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SZRD1Q7Z422 152 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 TDRD5Q8NAT2 981 aaKnown RBP5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FAM149B1Q96BN6 582 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 APOPT1Q96IL0 206 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 SLC13A1Q9BZW2 595 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 RRN3Q9NYV6 651 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 POLG2Q9UHN1 485 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 PFDN2Q9UHV9 154 aa5.73□□□□□ -1.49
PTPRB-202ENST00000334414 FAM92AA1XBS5 289 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 PABPC1P11940 636 aaKnown RBP5.72□□□□□ -1.49
PTPRB-202ENST00000334414 EXOSC10Q01780 885 aaKnown RBP5.72□□□□□ -1.49
PTPRB-202ENST00000334414 CHI3L2Q15782 390 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 INO80DQ53TQ3 878 aaPredicted RBP5.72□□□□□ -1.49
PTPRB-202ENST00000334414 G2E3Q7L622 706 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTPRB-202ENST00000334414 GRAMD1CQ8IYS0 662 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 ABI1Q8IZP0 508 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 HPS1Q92902 700 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 KIFC1Q9BW19 673 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 MYLK2Q9H1R3 596 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 RAB21Q9UL25 225 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 METP08581 1390 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 M0QYV0 167 aa5.72□□□□□ -1.49
PTPRB-202ENST00000334414 MYL12BO14950 172 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms