RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 PABPC4LP0CB38 370 aaKnown RBP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 ATF7P17544 494 aaPredicted RBP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 UBXN2AP68543 259 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 DNAL1Q4LDG9 190 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 ACAD11Q709F0 780 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 ULK2Q8IYT8 1036 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 MFSD14AQ96MC6 490 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 C11orf70Q9BRQ4 267 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 KCNK4Q9NYG8 393 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 CNTN3Q9P232 1028 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 TMCO1Q9UM00 188 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 SNCAIPQ9Y6H5 919 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 SCINQ9Y6U3 715 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 SLC16A4O15374 487 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 POLR2MP0CAP2 368 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 PIM1P11309 404 aaPredicted RBP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 DSG3P32926 999 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 NCKAP1LP55160 1127 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 SLC18A2Q05940 514 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 ADGRG6Q86SQ4 1221 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 TREML1Q86YW5 311 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.32
UPK3B-202ENST00000334348 APOPT1Q96IL0 206 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 RIT2Q99578 217 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
UPK3B-202ENST00000334348 BUD23O43709 281 aaKnown RBP17.03■□□□□ 0.32
UPK3B-202ENST00000334348 FKBP6O75344 327 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 PIAS1O75925 651 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 KRT1P04264 644 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 ENO1P06733 434 aaKnown RBP17.03■□□□□ 0.32
UPK3B-202ENST00000334348 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
UPK3B-202ENST00000334348 RARRES1P49788 294 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 AOC3Q16853 763 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 MSS51Q4VC12 460 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 FNBP1LQ5T0N5 605 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
UPK3B-202ENST00000334348 CCDC174Q6PII3 467 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TMEM179Q6ZVK1 233 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 USP37Q86T82 979 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 PPIL6Q8IXY8 311 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 NME8Q8N427 588 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 FBXO27Q8NI29 283 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TTC17Q96AE7 1141 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 FAM111AQ96PZ2 611 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TTC1Q99614 292 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 PI4K2AQ9BTU6 479 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 SLC7A8Q9UHI5 535 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 IQANK1A0A1B0GTG1 560 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 E7ESA3 106 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 SGK1O00141 431 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 BAG2O95816 211 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 IFNB1P01574 187 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 P4HBP07237 508 aaKnown RBP17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TSHRP16473 764 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 PTPN7P35236 360 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 SCNN1DP51172 638 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 MAP3K10Q02779 954 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 SPOCD1Q6ZMY3 1216 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 FBXO36Q8NEA4 188 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 WDR83Q9BRX9 315 aaKnown RBP17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TMEM121Q9BTD3 319 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 TAGLN3Q9UI15 199 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 ZHX2Q9Y6X8 837 aa17.03■□□□□ 0.32
UPK3B-202ENST00000334348 SPECC1L-ADORA2AF8WAN1 911 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 DPEP1P16444 411 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 PEX3P56589 373 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 GAD2Q05329 585 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 ZFYVE27Q5T4F4 411 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 AAGABQ6PD74 315 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 HHIPL2Q6UWX4 724 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 KYAT3Q6YP21 454 aaKnown RBP17.02■□□□□ 0.32
UPK3B-202ENST00000334348 SH2D5Q6ZV89 423 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 MIER3Q7Z3K6 550 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 LCA5Q86VQ0 697 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 PHF13Q86YI8 300 aaPredicted RBP17.02■□□□□ 0.32
UPK3B-202ENST00000334348 RHPN2Q8IUC4 686 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 NAT8LQ8N9F0 302 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 NAT14Q8WUY8 206 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 FBXL18Q96ME1 805 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 THTPAQ9BU02 230 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 EBF3Q9H4W6 596 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 C1orf112Q9NSG2 853 aa17.02■□□□□ 0.32
UPK3B-202ENST00000334348 CHCHD3Q9NX63 227 aaKnown RBP17.02■□□□□ 0.32
UPK3B-202ENST00000334348 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
UPK3B-202ENST00000334348 PYGBP11216 843 aa17.02■□□□□ 0.31
UPK3B-202ENST00000334348 ECE1P42892 770 aa17.02■□□□□ 0.31
UPK3B-202ENST00000334348 NOMO3P69849 1222 aa17.02■□□□□ 0.31
UPK3B-202ENST00000334348 CYP24A1Q07973 514 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms